Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
MTHFRP42898 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
MTHFRP42898 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
MTHFRP42898 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.52■□□□□ 0.39
MTHFRP42898 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
MTHFRP42898 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
MTHFRP42898 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
MTHFRP42898 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC17.52■□□□□ 0.39
MTHFRP42898 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.39
MTHFRP42898 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
MTHFRP42898 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
MTHFRP42898 AC138028.4-201ENST00000564984 1845 ntBASIC17.51■□□□□ 0.39
MTHFRP42898 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.51■□□□□ 0.39
MTHFRP42898 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MTHFRP42898 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MTHFRP42898 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
MTHFRP42898 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MTHFRP42898 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MTHFRP42898 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
MTHFRP42898 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MTHFRP42898 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MTHFRP42898 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
MTHFRP42898 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
MTHFRP42898 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MTHFRP42898 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MTHFRP42898 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MTHFRP42898 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.51■□□□□ 0.39
MTHFRP42898 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.51■□□□□ 0.39
MTHFRP42898 HLA-V-204ENST00000476601 1289 ntBASIC17.51■□□□□ 0.39
MTHFRP42898 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.51■□□□□ 0.39
MTHFRP42898 REEP4-207ENST00000523293 913 ntTSL 3 BASIC17.51■□□□□ 0.39
MTHFRP42898 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MTHFRP42898 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.51■□□□□ 0.39
MTHFRP42898 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.51■□□□□ 0.39
MTHFRP42898 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC17.51■□□□□ 0.39
MTHFRP42898 AL138828.2-201ENST00000615812 383 ntBASIC17.51■□□□□ 0.39
MTHFRP42898 SERF2-217ENST00000630046 862 ntTSL 5 BASIC17.51■□□□□ 0.39
MTHFRP42898 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.51■□□□□ 0.39
MTHFRP42898 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
MTHFRP42898 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MTHFRP42898 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.51■□□□□ 0.39
MTHFRP42898 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
MTHFRP42898 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
MTHFRP42898 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MTHFRP42898 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
MTHFRP42898 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
MTHFRP42898 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.5■□□□□ 0.39
MTHFRP42898 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MTHFRP42898 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
MTHFRP42898 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC17.5■□□□□ 0.39
MTHFRP42898 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
MTHFRP42898 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
MTHFRP42898 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MTHFRP42898 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
MTHFRP42898 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MTHFRP42898 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.5■□□□□ 0.39
MTHFRP42898 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MTHFRP42898 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
MTHFRP42898 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MTHFRP42898 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
MTHFRP42898 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
MTHFRP42898 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MTHFRP42898 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MTHFRP42898 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
MTHFRP42898 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
MTHFRP42898 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
MTHFRP42898 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.5■□□□□ 0.39
MTHFRP42898 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.5■□□□□ 0.39
MTHFRP42898 ATP5G2P4-201ENST00000442175 420 ntBASIC17.5■□□□□ 0.39
MTHFRP42898 MPI-209ENST00000564003 1195 ntTSL 2 BASIC17.5■□□□□ 0.39
MTHFRP42898 AL138918.1-201ENST00000568306 659 ntBASIC17.5■□□□□ 0.39
MTHFRP42898 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
MTHFRP42898 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
MTHFRP42898 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.5■□□□□ 0.39
MTHFRP42898 SLC22A20-204ENST00000530038 1673 ntBASIC17.5■□□□□ 0.39
MTHFRP42898 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.5■□□□□ 0.39
MTHFRP42898 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MTHFRP42898 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
MTHFRP42898 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MTHFRP42898 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MTHFRP42898 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
MTHFRP42898 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.5■□□□□ 0.39
MTHFRP42898 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.5■□□□□ 0.39
MTHFRP42898 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MTHFRP42898 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MTHFRP42898 LINC00304-203ENST00000565008 1864 ntBASIC17.5■□□□□ 0.39
MTHFRP42898 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MTHFRP42898 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.5■□□□□ 0.39
MTHFRP42898 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.5■□□□□ 0.39
MTHFRP42898 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
MTHFRP42898 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
MTHFRP42898 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MTHFRP42898 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MTHFRP42898 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.49■□□□□ 0.39
MTHFRP42898 AP3S2-216ENST00000617003 1561 ntBASIC17.49■□□□□ 0.39
MTHFRP42898 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
MTHFRP42898 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.49■□□□□ 0.39
MTHFRP42898 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MTHFRP42898 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
MTHFRP42898 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms