Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 GRAMD4P3-201ENST00000621665 1669 ntBASIC19.12■□□□□ 0.65
COPB2P35606 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC19.12■□□□□ 0.65
COPB2P35606 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
COPB2P35606 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
COPB2P35606 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COPB2P35606 PP14571-201ENST00000404327 934 ntTSL 2 BASIC19.12■□□□□ 0.65
COPB2P35606 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC19.12■□□□□ 0.65
COPB2P35606 AC002472.2-201ENST00000442739 958 ntBASIC19.12■□□□□ 0.65
COPB2P35606 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC19.12■□□□□ 0.65
COPB2P35606 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
COPB2P35606 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COPB2P35606 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
COPB2P35606 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC19.12■□□□□ 0.65
COPB2P35606 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC19.12■□□□□ 0.65
COPB2P35606 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC19.12■□□□□ 0.65
COPB2P35606 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COPB2P35606 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC19.12■□□□□ 0.65
COPB2P35606 SIGLEC29P-201ENST00000599873 1114 ntBASIC19.12■□□□□ 0.65
COPB2P35606 YTHDF3-AS1-201ENST00000603538 718 ntBASIC19.12■□□□□ 0.65
COPB2P35606 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC19.12■□□□□ 0.65
COPB2P35606 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COPB2P35606 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COPB2P35606 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
COPB2P35606 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COPB2P35606 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COPB2P35606 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COPB2P35606 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COPB2P35606 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COPB2P35606 STX3-203ENST00000529177 1571 ntTSL 2 BASIC19.11■□□□□ 0.65
COPB2P35606 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
COPB2P35606 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
COPB2P35606 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
COPB2P35606 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COPB2P35606 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COPB2P35606 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
COPB2P35606 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
COPB2P35606 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC19.11■□□□□ 0.65
COPB2P35606 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COPB2P35606 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
COPB2P35606 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC19.11■□□□□ 0.65
COPB2P35606 OARD1-208ENST00000469104 704 ntTSL 2 BASIC19.11■□□□□ 0.65
COPB2P35606 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC19.11■□□□□ 0.65
COPB2P35606 AC097493.3-201ENST00000509725 367 ntBASIC19.11■□□□□ 0.65
COPB2P35606 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
COPB2P35606 POLD4-211ENST00000539074 714 ntTSL 3 BASIC19.11■□□□□ 0.65
COPB2P35606 RARRES2P9-201ENST00000565168 469 ntBASIC19.11■□□□□ 0.65
COPB2P35606 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC19.11■□□□□ 0.65
COPB2P35606 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC19.11■□□□□ 0.65
COPB2P35606 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC19.11■□□□□ 0.65
COPB2P35606 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.11■□□□□ 0.65
COPB2P35606 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
COPB2P35606 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COPB2P35606 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.11■□□□□ 0.65
COPB2P35606 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
COPB2P35606 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC19.11■□□□□ 0.65
COPB2P35606 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COPB2P35606 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COPB2P35606 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COPB2P35606 PP12613-201ENST00000424958 2230 ntBASIC19.1■□□□□ 0.65
COPB2P35606 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
COPB2P35606 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC19.1■□□□□ 0.65
COPB2P35606 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COPB2P35606 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
COPB2P35606 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COPB2P35606 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COPB2P35606 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COPB2P35606 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COPB2P35606 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC19.1■□□□□ 0.65
COPB2P35606 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC19.1■□□□□ 0.65
COPB2P35606 CFL1-212ENST00000531413 636 ntTSL 3 BASIC19.1■□□□□ 0.65
COPB2P35606 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COPB2P35606 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC19.1■□□□□ 0.65
COPB2P35606 AL138918.1-201ENST00000568306 659 ntBASIC19.1■□□□□ 0.65
COPB2P35606 MIR4453-201ENST00000584019 89 ntBASIC19.1■□□□□ 0.65
COPB2P35606 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC19.1■□□□□ 0.65
COPB2P35606 AC018529.1-201ENST00000613063 361 ntBASIC19.1■□□□□ 0.65
COPB2P35606 HFE2-206ENST00000634927 506 ntTSL 4 BASIC19.1■□□□□ 0.65
COPB2P35606 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.1■□□□□ 0.65
COPB2P35606 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
COPB2P35606 AC020916.1-201ENST00000587762 1774 ntBASIC19.1■□□□□ 0.65
COPB2P35606 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
COPB2P35606 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
COPB2P35606 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COPB2P35606 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
COPB2P35606 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COPB2P35606 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC19.1■□□□□ 0.65
COPB2P35606 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COPB2P35606 AC108860.2-201ENST00000562760 2183 ntBASIC19.1■□□□□ 0.65
COPB2P35606 AC090340.1-201ENST00000620778 4980 ntBASIC19.1■□□□□ 0.65
COPB2P35606 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COPB2P35606 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC19.1■□□□□ 0.65
COPB2P35606 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
COPB2P35606 AC080080.1-201ENST00000625121 2420 ntBASIC19.1■□□□□ 0.65
COPB2P35606 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COPB2P35606 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.09■□□□□ 0.65
COPB2P35606 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC19.09■□□□□ 0.65
COPB2P35606 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC19.09■□□□□ 0.65
COPB2P35606 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
COPB2P35606 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COPB2P35606 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms