Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RFC4P35249 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
RFC4P35249 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RFC4P35249 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RFC4P35249 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
RFC4P35249 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFC4P35249 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RFC4P35249 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RFC4P35249 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFC4P35249 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFC4P35249 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
RFC4P35249 AL671710.1-201ENST00000610245 2349 ntBASIC20.88■□□□□ 0.93
RFC4P35249 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC20.88■□□□□ 0.93
RFC4P35249 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RFC4P35249 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFC4P35249 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RFC4P35249 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFC4P35249 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RFC4P35249 AC114501.2-201ENST00000439631 535 ntBASIC20.88■□□□□ 0.93
RFC4P35249 AC022210.1-201ENST00000449856 793 ntBASIC20.88■□□□□ 0.93
RFC4P35249 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC20.88■□□□□ 0.93
RFC4P35249 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
RFC4P35249 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC20.88■□□□□ 0.93
RFC4P35249 APOC4-201ENST00000591600 348 ntTSL 3 BASIC20.88■□□□□ 0.93
RFC4P35249 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC20.88■□□□□ 0.93
RFC4P35249 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
RFC4P35249 FHL2-212ENST00000607522 759 ntTSL 2 BASIC20.88■□□□□ 0.93
RFC4P35249 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC20.88■□□□□ 0.93
RFC4P35249 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RFC4P35249 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFC4P35249 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RFC4P35249 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
RFC4P35249 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFC4P35249 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC20.88■□□□□ 0.93
RFC4P35249 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC20.88■□□□□ 0.93
RFC4P35249 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RFC4P35249 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RFC4P35249 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RFC4P35249 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC20.87■□□□□ 0.93
RFC4P35249 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RFC4P35249 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RFC4P35249 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC20.87■□□□□ 0.93
RFC4P35249 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RFC4P35249 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
RFC4P35249 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RFC4P35249 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RFC4P35249 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC20.87■□□□□ 0.93
RFC4P35249 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC20.87■□□□□ 0.93
RFC4P35249 RN7SL837P-201ENST00000463010 287 ntBASIC20.87■□□□□ 0.93
RFC4P35249 GLI4-203ENST00000517468 963 ntTSL 5 BASIC20.87■□□□□ 0.93
RFC4P35249 AC055876.2-201ENST00000531834 546 ntBASIC20.87■□□□□ 0.93
RFC4P35249 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC20.87■□□□□ 0.93
RFC4P35249 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC20.87■□□□□ 0.93
RFC4P35249 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RFC4P35249 CD276-201ENST00000318424 2738 ntTSL 5 BASIC20.87■□□□□ 0.93
RFC4P35249 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
RFC4P35249 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RFC4P35249 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RFC4P35249 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
RFC4P35249 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RFC4P35249 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
RFC4P35249 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RFC4P35249 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RFC4P35249 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RFC4P35249 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC20.86■□□□□ 0.93
RFC4P35249 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RFC4P35249 TTTY23B-201ENST00000442790 549 ntBASIC20.86■□□□□ 0.93
RFC4P35249 SERBP1P3-201ENST00000459980 809 ntBASIC20.86■□□□□ 0.93
RFC4P35249 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC20.86■□□□□ 0.93
RFC4P35249 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC20.86■□□□□ 0.93
RFC4P35249 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC20.86■□□□□ 0.93
RFC4P35249 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RFC4P35249 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC20.86■□□□□ 0.93
RFC4P35249 RPS15-212ENST00000593052 629 ntTSL 2 BASIC20.86■□□□□ 0.93
RFC4P35249 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC20.86■□□□□ 0.93
RFC4P35249 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
RFC4P35249 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RFC4P35249 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
RFC4P35249 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.86■□□□□ 0.93
RFC4P35249 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RFC4P35249 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
RFC4P35249 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RFC4P35249 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RFC4P35249 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC20.86■□□□□ 0.93
RFC4P35249 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
RFC4P35249 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC20.85■□□□□ 0.93
RFC4P35249 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RFC4P35249 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC20.85■□□□□ 0.93
RFC4P35249 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
RFC4P35249 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
RFC4P35249 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
RFC4P35249 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RFC4P35249 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC20.85■□□□□ 0.93
RFC4P35249 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFC4P35249 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RFC4P35249 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFC4P35249 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC20.85■□□□□ 0.93
RFC4P35249 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC20.85■□□□□ 0.93
RFC4P35249 NAA38-207ENST00000576861 556 ntTSL 3 BASIC20.85■□□□□ 0.93
RFC4P35249 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms