Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.96■□□□□ 0.15
PTPN6P29350 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTPN6P29350 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.96■□□□□ 0.15
PTPN6P29350 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTPN6P29350 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTPN6P29350 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTPN6P29350 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.96■□□□□ 0.15
PTPN6P29350 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
PTPN6P29350 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.96■□□□□ 0.15
PTPN6P29350 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTPN6P29350 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.96■□□□□ 0.15
PTPN6P29350 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PTPN6P29350 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTPN6P29350 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.96■□□□□ 0.15
PTPN6P29350 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PTPN6P29350 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PTPN6P29350 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PTPN6P29350 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.96■□□□□ 0.15
PTPN6P29350 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.96■□□□□ 0.15
PTPN6P29350 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTPN6P29350 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PTPN6P29350 PRYP5-201ENST00000451909 266 ntBASIC15.96■□□□□ 0.15
PTPN6P29350 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
PTPN6P29350 AF186996.4-201ENST00000467186 377 ntBASIC15.96■□□□□ 0.15
PTPN6P29350 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTPN6P29350 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTPN6P29350 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.96■□□□□ 0.15
PTPN6P29350 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.96■□□□□ 0.15
PTPN6P29350 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.96■□□□□ 0.15
PTPN6P29350 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.96■□□□□ 0.15
PTPN6P29350 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.96■□□□□ 0.15
PTPN6P29350 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTPN6P29350 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTPN6P29350 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.96■□□□□ 0.15
PTPN6P29350 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
PTPN6P29350 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTPN6P29350 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PTPN6P29350 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
PTPN6P29350 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.96■□□□□ 0.14
PTPN6P29350 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
PTPN6P29350 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
PTPN6P29350 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.96■□□□□ 0.14
PTPN6P29350 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.96■□□□□ 0.14
PTPN6P29350 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
PTPN6P29350 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
PTPN6P29350 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PTPN6P29350 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PTPN6P29350 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
PTPN6P29350 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
PTPN6P29350 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
PTPN6P29350 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
PTPN6P29350 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
PTPN6P29350 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PTPN6P29350 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.95■□□□□ 0.14
PTPN6P29350 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PTPN6P29350 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PTPN6P29350 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
PTPN6P29350 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PTPN6P29350 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PTPN6P29350 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PTPN6P29350 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PTPN6P29350 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PTPN6P29350 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.95■□□□□ 0.14
PTPN6P29350 AC018712.1-201ENST00000455767 687 ntBASIC15.95■□□□□ 0.14
PTPN6P29350 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
PTPN6P29350 RNPS1P1-201ENST00000507437 918 ntBASIC15.95■□□□□ 0.14
PTPN6P29350 AC021087.4-201ENST00000563761 564 ntBASIC15.95■□□□□ 0.14
PTPN6P29350 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.95■□□□□ 0.14
PTPN6P29350 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.95■□□□□ 0.14
PTPN6P29350 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PTPN6P29350 AL773604.1-201ENST00000617417 272 ntBASIC15.95■□□□□ 0.14
PTPN6P29350 AC148477.8-201ENST00000624298 468 ntBASIC15.95■□□□□ 0.14
PTPN6P29350 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
PTPN6P29350 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PTPN6P29350 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
PTPN6P29350 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
PTPN6P29350 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
PTPN6P29350 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.95■□□□□ 0.14
PTPN6P29350 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PTPN6P29350 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.95■□□□□ 0.14
PTPN6P29350 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.95■□□□□ 0.14
PTPN6P29350 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PTPN6P29350 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.95■□□□□ 0.14
PTPN6P29350 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PTPN6P29350 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PTPN6P29350 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
PTPN6P29350 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
PTPN6P29350 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PTPN6P29350 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PTPN6P29350 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.94■□□□□ 0.14
PTPN6P29350 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PTPN6P29350 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
PTPN6P29350 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
PTPN6P29350 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.94■□□□□ 0.14
PTPN6P29350 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PTPN6P29350 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
PTPN6P29350 CROCCP1-201ENST00000426910 5675 ntBASIC15.94■□□□□ 0.14
PTPN6P29350 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PTPN6P29350 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PTPN6P29350 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms