Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
VARSP26640 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
VARSP26640 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
VARSP26640 PRYP5-201ENST00000451909 266 ntBASIC16.58■□□□□ 0.24
VARSP26640 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.58■□□□□ 0.24
VARSP26640 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
VARSP26640 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.58■□□□□ 0.24
VARSP26640 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
VARSP26640 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
VARSP26640 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.58■□□□□ 0.24
VARSP26640 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.58■□□□□ 0.24
VARSP26640 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
VARSP26640 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
VARSP26640 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
VARSP26640 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VARSP26640 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.58■□□□□ 0.24
VARSP26640 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.58■□□□□ 0.24
VARSP26640 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VARSP26640 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.58■□□□□ 0.24
VARSP26640 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
VARSP26640 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
VARSP26640 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
VARSP26640 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VARSP26640 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
VARSP26640 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VARSP26640 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
VARSP26640 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VARSP26640 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
VARSP26640 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
VARSP26640 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VARSP26640 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VARSP26640 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
VARSP26640 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VARSP26640 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
VARSP26640 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
VARSP26640 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
VARSP26640 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.57■□□□□ 0.24
VARSP26640 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.57■□□□□ 0.24
VARSP26640 GPR89P-201ENST00000407924 1495 ntBASIC16.57■□□□□ 0.24
VARSP26640 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VARSP26640 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
VARSP26640 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
VARSP26640 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VARSP26640 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
VARSP26640 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.57■□□□□ 0.24
VARSP26640 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
VARSP26640 AC124947.2-201ENST00000547118 1133 ntBASIC16.57■□□□□ 0.24
VARSP26640 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.57■□□□□ 0.24
VARSP26640 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.57■□□□□ 0.24
VARSP26640 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.57■□□□□ 0.24
VARSP26640 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.57■□□□□ 0.24
VARSP26640 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.57■□□□□ 0.24
VARSP26640 MTDHP4-201ENST00000600287 670 ntBASIC16.57■□□□□ 0.24
VARSP26640 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
VARSP26640 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
VARSP26640 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VARSP26640 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VARSP26640 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
VARSP26640 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
VARSP26640 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VARSP26640 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
VARSP26640 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VARSP26640 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.57■□□□□ 0.24
VARSP26640 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
VARSP26640 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
VARSP26640 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
VARSP26640 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VARSP26640 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
VARSP26640 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
VARSP26640 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
VARSP26640 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
VARSP26640 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.56■□□□□ 0.24
VARSP26640 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
VARSP26640 TCAF2P1-201ENST00000291129 2421 ntBASIC16.56■□□□□ 0.24
VARSP26640 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VARSP26640 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.56■□□□□ 0.24
VARSP26640 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.56■□□□□ 0.24
VARSP26640 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
VARSP26640 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
VARSP26640 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.56■□□□□ 0.24
VARSP26640 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.56■□□□□ 0.24
VARSP26640 AC017007.3-201ENST00000479865 435 ntBASIC16.56■□□□□ 0.24
VARSP26640 RPL13AP23-201ENST00000480739 586 ntBASIC16.56■□□□□ 0.24
VARSP26640 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.56■□□□□ 0.24
VARSP26640 AC021087.4-201ENST00000563761 564 ntBASIC16.56■□□□□ 0.24
VARSP26640 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.56■□□□□ 0.24
VARSP26640 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.56■□□□□ 0.24
VARSP26640 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
VARSP26640 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
VARSP26640 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
VARSP26640 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
VARSP26640 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.56■□□□□ 0.24
VARSP26640 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
VARSP26640 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
VARSP26640 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
VARSP26640 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
VARSP26640 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
VARSP26640 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
VARSP26640 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
VARSP26640 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms