Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
KCNA3P22001 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KCNA3P22001 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
KCNA3P22001 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
KCNA3P22001 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC20.3■□□□□ 0.84
KCNA3P22001 HLA-DPB2-205ENST00000435074 1188 ntBASIC20.3■□□□□ 0.84
KCNA3P22001 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC20.3■□□□□ 0.84
KCNA3P22001 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
KCNA3P22001 PAM16-204ENST00000571941 674 ntTSL 3 BASIC20.3■□□□□ 0.84
KCNA3P22001 SIGLEC29P-201ENST00000599873 1114 ntBASIC20.3■□□□□ 0.84
KCNA3P22001 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KCNA3P22001 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.3■□□□□ 0.84
KCNA3P22001 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.3■□□□□ 0.84
KCNA3P22001 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC20.3■□□□□ 0.84
KCNA3P22001 AC018665.1-201ENST00000622927 1362 ntBASIC20.3■□□□□ 0.84
KCNA3P22001 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.3■□□□□ 0.84
KCNA3P22001 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
KCNA3P22001 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC20.29■□□□□ 0.84
KCNA3P22001 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.29■□□□□ 0.84
KCNA3P22001 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KCNA3P22001 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
KCNA3P22001 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KCNA3P22001 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KCNA3P22001 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KCNA3P22001 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC20.29■□□□□ 0.84
KCNA3P22001 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC20.29■□□□□ 0.84
KCNA3P22001 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
KCNA3P22001 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KCNA3P22001 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KCNA3P22001 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KCNA3P22001 CTBP2P5-201ENST00000454986 1264 ntBASIC20.29■□□□□ 0.84
KCNA3P22001 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC20.29■□□□□ 0.84
KCNA3P22001 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC20.29■□□□□ 0.84
KCNA3P22001 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC20.29■□□□□ 0.84
KCNA3P22001 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC20.29■□□□□ 0.84
KCNA3P22001 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC20.29■□□□□ 0.84
KCNA3P22001 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC20.29■□□□□ 0.84
KCNA3P22001 AC061975.2-201ENST00000581722 295 ntBASIC20.29■□□□□ 0.84
KCNA3P22001 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC20.29■□□□□ 0.84
KCNA3P22001 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.29■□□□□ 0.84
KCNA3P22001 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
KCNA3P22001 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
KCNA3P22001 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KCNA3P22001 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KCNA3P22001 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
KCNA3P22001 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
KCNA3P22001 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
KCNA3P22001 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KCNA3P22001 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KCNA3P22001 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KCNA3P22001 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
KCNA3P22001 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KCNA3P22001 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC20.28■□□□□ 0.84
KCNA3P22001 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
KCNA3P22001 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KCNA3P22001 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KCNA3P22001 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KCNA3P22001 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC20.28■□□□□ 0.84
KCNA3P22001 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
KCNA3P22001 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
KCNA3P22001 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC20.28■□□□□ 0.84
KCNA3P22001 WDR53-204ENST00000433160 887 ntTSL 5 BASIC20.28■□□□□ 0.84
KCNA3P22001 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
KCNA3P22001 AL355994.2-201ENST00000447882 704 ntBASIC20.28■□□□□ 0.84
KCNA3P22001 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC20.28■□□□□ 0.84
KCNA3P22001 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC20.28■□□□□ 0.84
KCNA3P22001 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC20.28■□□□□ 0.84
KCNA3P22001 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC20.28■□□□□ 0.84
KCNA3P22001 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC20.28■□□□□ 0.84
KCNA3P22001 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
KCNA3P22001 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
KCNA3P22001 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
KCNA3P22001 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
KCNA3P22001 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KCNA3P22001 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC20.28■□□□□ 0.84
KCNA3P22001 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
KCNA3P22001 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
KCNA3P22001 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC20.27■□□□□ 0.84
KCNA3P22001 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC20.27■□□□□ 0.84
KCNA3P22001 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC20.27■□□□□ 0.84
KCNA3P22001 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC20.27■□□□□ 0.84
KCNA3P22001 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC20.27■□□□□ 0.84
KCNA3P22001 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KCNA3P22001 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KCNA3P22001 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
KCNA3P22001 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC20.27■□□□□ 0.84
KCNA3P22001 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC20.27■□□□□ 0.84
KCNA3P22001 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
KCNA3P22001 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KCNA3P22001 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC20.27■□□□□ 0.84
KCNA3P22001 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC20.27■□□□□ 0.84
KCNA3P22001 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC20.27■□□□□ 0.84
KCNA3P22001 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC20.27■□□□□ 0.84
KCNA3P22001 AC108725.1-201ENST00000495472 409 ntBASIC20.27■□□□□ 0.84
KCNA3P22001 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC20.27■□□□□ 0.84
KCNA3P22001 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KCNA3P22001 SLC25A47P1-201ENST00000531577 414 ntBASIC20.27■□□□□ 0.84
KCNA3P22001 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
KCNA3P22001 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC20.27■□□□□ 0.84
KCNA3P22001 AC103810.3-201ENST00000583567 96 ntBASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms