Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NCLP19338 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
NCLP19338 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
NCLP19338 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC20.08■□□□□ 0.81
NCLP19338 AC007950.2-201ENST00000615045 2347 ntBASIC20.08■□□□□ 0.81
NCLP19338 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NCLP19338 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
NCLP19338 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NCLP19338 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC20.08■□□□□ 0.81
NCLP19338 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NCLP19338 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
NCLP19338 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NCLP19338 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NCLP19338 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
NCLP19338 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NCLP19338 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NCLP19338 COX5BP2-201ENST00000392354 334 ntBASIC20.08■□□□□ 0.81
NCLP19338 TSPY22P-201ENST00000427496 604 ntBASIC20.08■□□□□ 0.81
NCLP19338 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC20.08■□□□□ 0.81
NCLP19338 IGHV3-52-201ENST00000519770 353 ntBASIC20.08■□□□□ 0.81
NCLP19338 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC20.08■□□□□ 0.81
NCLP19338 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC20.08■□□□□ 0.81
NCLP19338 AC092329.2-201ENST00000598402 547 ntBASIC20.08■□□□□ 0.81
NCLP19338 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC20.08■□□□□ 0.81
NCLP19338 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NCLP19338 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
NCLP19338 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NCLP19338 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
NCLP19338 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
NCLP19338 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC20.08■□□□□ 0.8
NCLP19338 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
NCLP19338 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NCLP19338 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NCLP19338 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
NCLP19338 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC20.08■□□□□ 0.8
NCLP19338 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
NCLP19338 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC20.08■□□□□ 0.8
NCLP19338 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
NCLP19338 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NCLP19338 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NCLP19338 SLC9A7P1-201ENST00000554295 3311 ntBASIC20.07■□□□□ 0.8
NCLP19338 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC20.07■□□□□ 0.8
NCLP19338 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
NCLP19338 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
NCLP19338 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
NCLP19338 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
NCLP19338 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NCLP19338 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NCLP19338 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
NCLP19338 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20.07■□□□□ 0.8
NCLP19338 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC20.07■□□□□ 0.8
NCLP19338 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NCLP19338 AL390719.2-201ENST00000606993 987 ntBASIC20.07■□□□□ 0.8
NCLP19338 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC20.07■□□□□ 0.8
NCLP19338 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NCLP19338 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
NCLP19338 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NCLP19338 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
NCLP19338 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
NCLP19338 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NCLP19338 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NCLP19338 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NCLP19338 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
NCLP19338 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NCLP19338 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NCLP19338 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.06■□□□□ 0.8
NCLP19338 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NCLP19338 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NCLP19338 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
NCLP19338 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NCLP19338 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NCLP19338 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NCLP19338 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NCLP19338 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NCLP19338 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NCLP19338 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC20.06■□□□□ 0.8
NCLP19338 CHCHD2P8-201ENST00000429873 447 ntBASIC20.06■□□□□ 0.8
NCLP19338 PON3-205ENST00000451904 1053 ntTSL 3 BASIC20.06■□□□□ 0.8
NCLP19338 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.06■□□□□ 0.8
NCLP19338 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NCLP19338 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20.06■□□□□ 0.8
NCLP19338 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC20.06■□□□□ 0.8
NCLP19338 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
NCLP19338 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC20.06■□□□□ 0.8
NCLP19338 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NCLP19338 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NCLP19338 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
NCLP19338 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
NCLP19338 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
NCLP19338 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NCLP19338 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NCLP19338 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NCLP19338 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
NCLP19338 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
NCLP19338 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
NCLP19338 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NCLP19338 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NCLP19338 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
NCLP19338 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NCLP19338 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms