Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT3P12035 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT3P12035 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
KRT3P12035 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT3P12035 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
KRT3P12035 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.71■□□□□ 0.43
KRT3P12035 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
KRT3P12035 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
KRT3P12035 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
KRT3P12035 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
KRT3P12035 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
KRT3P12035 AC006538.1-201ENST00000567905 1585 ntBASIC17.7■□□□□ 0.42
KRT3P12035 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
KRT3P12035 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT3P12035 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT3P12035 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.7■□□□□ 0.42
KRT3P12035 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT3P12035 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT3P12035 AC131009.4-201ENST00000624048 1740 ntBASIC17.7■□□□□ 0.42
KRT3P12035 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
KRT3P12035 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.7■□□□□ 0.42
KRT3P12035 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
KRT3P12035 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
KRT3P12035 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
KRT3P12035 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT3P12035 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.7■□□□□ 0.42
KRT3P12035 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.7■□□□□ 0.42
KRT3P12035 AC098831.1-202ENST00000438821 336 ntBASIC17.7■□□□□ 0.42
KRT3P12035 AC009078.2-202ENST00000463353 338 ntBASIC17.7■□□□□ 0.42
KRT3P12035 HLA-J-202ENST00000469281 1241 ntBASIC17.7■□□□□ 0.42
KRT3P12035 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.7■□□□□ 0.42
KRT3P12035 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.7■□□□□ 0.42
KRT3P12035 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.7■□□□□ 0.42
KRT3P12035 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT3P12035 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.7■□□□□ 0.42
KRT3P12035 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
KRT3P12035 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.7■□□□□ 0.42
KRT3P12035 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT3P12035 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
KRT3P12035 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT3P12035 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.7■□□□□ 0.42
KRT3P12035 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT3P12035 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
KRT3P12035 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.7■□□□□ 0.42
KRT3P12035 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT3P12035 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.7■□□□□ 0.42
KRT3P12035 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
KRT3P12035 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
KRT3P12035 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.7■□□□□ 0.42
KRT3P12035 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
KRT3P12035 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.7■□□□□ 0.42
KRT3P12035 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.7■□□□□ 0.42
KRT3P12035 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.7■□□□□ 0.42
KRT3P12035 AC079328.2-201ENST00000561241 3354 ntBASIC17.7■□□□□ 0.42
KRT3P12035 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
KRT3P12035 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
KRT3P12035 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
KRT3P12035 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
KRT3P12035 AL353732.1-201ENST00000569618 1459 ntBASIC17.69■□□□□ 0.42
KRT3P12035 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT3P12035 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
KRT3P12035 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT3P12035 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
KRT3P12035 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.69■□□□□ 0.42
KRT3P12035 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT3P12035 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
KRT3P12035 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT3P12035 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
KRT3P12035 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
KRT3P12035 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT3P12035 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.69■□□□□ 0.42
KRT3P12035 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
KRT3P12035 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.69■□□□□ 0.42
KRT3P12035 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.69■□□□□ 0.42
KRT3P12035 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
KRT3P12035 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.69■□□□□ 0.42
KRT3P12035 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.69■□□□□ 0.42
KRT3P12035 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.69■□□□□ 0.42
KRT3P12035 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT3P12035 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
KRT3P12035 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT3P12035 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT3P12035 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT3P12035 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
KRT3P12035 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.69■□□□□ 0.42
KRT3P12035 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT3P12035 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.69■□□□□ 0.42
KRT3P12035 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.69■□□□□ 0.42
KRT3P12035 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.69■□□□□ 0.42
KRT3P12035 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.69■□□□□ 0.42
KRT3P12035 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
KRT3P12035 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT3P12035 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
KRT3P12035 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT3P12035 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.68■□□□□ 0.42
KRT3P12035 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
KRT3P12035 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
KRT3P12035 SLC22A20-204ENST00000530038 1673 ntBASIC17.68■□□□□ 0.42
KRT3P12035 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
KRT3P12035 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms