Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.82■□□□□ 0.12
RAB40ALP0C0E4 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RAB40ALP0C0E4 AL512356.2-201ENST00000546955 174 ntBASIC15.82■□□□□ 0.12
RAB40ALP0C0E4 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.82■□□□□ 0.12
RAB40ALP0C0E4 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.82■□□□□ 0.12
RAB40ALP0C0E4 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.82■□□□□ 0.12
RAB40ALP0C0E4 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.82■□□□□ 0.12
RAB40ALP0C0E4 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.82■□□□□ 0.12
RAB40ALP0C0E4 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RAB40ALP0C0E4 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.82■□□□□ 0.12
RAB40ALP0C0E4 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RAB40ALP0C0E4 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB40ALP0C0E4 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB40ALP0C0E4 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.82■□□□□ 0.12
RAB40ALP0C0E4 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.82■□□□□ 0.12
RAB40ALP0C0E4 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB40ALP0C0E4 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RAB40ALP0C0E4 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB40ALP0C0E4 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB40ALP0C0E4 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB40ALP0C0E4 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB40ALP0C0E4 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
RAB40ALP0C0E4 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB40ALP0C0E4 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB40ALP0C0E4 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
RAB40ALP0C0E4 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB40ALP0C0E4 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RAB40ALP0C0E4 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RAB40ALP0C0E4 RNU1-129P-201ENST00000384064 167 ntBASIC15.81■□□□□ 0.12
RAB40ALP0C0E4 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.81■□□□□ 0.12
RAB40ALP0C0E4 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.81■□□□□ 0.12
RAB40ALP0C0E4 KRT18P32-201ENST00000424695 1287 ntBASIC15.81■□□□□ 0.12
RAB40ALP0C0E4 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.81■□□□□ 0.12
RAB40ALP0C0E4 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.81■□□□□ 0.12
RAB40ALP0C0E4 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.81■□□□□ 0.12
RAB40ALP0C0E4 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
RAB40ALP0C0E4 U1.21-201ENST00000580816 167 ntBASIC15.81■□□□□ 0.12
RAB40ALP0C0E4 AC092364.2-202ENST00000597012 1073 ntBASIC15.81■□□□□ 0.12
RAB40ALP0C0E4 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.81■□□□□ 0.12
RAB40ALP0C0E4 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.81■□□□□ 0.12
RAB40ALP0C0E4 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RAB40ALP0C0E4 AC093512.1-201ENST00000617969 520 ntBASIC15.81■□□□□ 0.12
RAB40ALP0C0E4 AL021920.2-201ENST00000624828 1351 ntBASIC15.81■□□□□ 0.12
RAB40ALP0C0E4 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.81■□□□□ 0.12
RAB40ALP0C0E4 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
RAB40ALP0C0E4 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB40ALP0C0E4 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB40ALP0C0E4 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB40ALP0C0E4 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RAB40ALP0C0E4 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
RAB40ALP0C0E4 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB40ALP0C0E4 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
RAB40ALP0C0E4 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RAB40ALP0C0E4 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.8■□□□□ 0.12
RAB40ALP0C0E4 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RAB40ALP0C0E4 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RAB40ALP0C0E4 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB40ALP0C0E4 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB40ALP0C0E4 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB40ALP0C0E4 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB40ALP0C0E4 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
RAB40ALP0C0E4 AC116353.5-201ENST00000638148 1699 ntBASIC15.8■□□□□ 0.12
RAB40ALP0C0E4 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
RAB40ALP0C0E4 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RAB40ALP0C0E4 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
RAB40ALP0C0E4 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RAB40ALP0C0E4 WASH6P-202ENST00000359512 1437 ntBASIC15.8■□□□□ 0.12
RAB40ALP0C0E4 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB40ALP0C0E4 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.8■□□□□ 0.12
RAB40ALP0C0E4 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RAB40ALP0C0E4 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.8■□□□□ 0.12
RAB40ALP0C0E4 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.8■□□□□ 0.12
RAB40ALP0C0E4 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RAB40ALP0C0E4 FAM8A3P-201ENST00000427218 844 ntBASIC15.8■□□□□ 0.12
RAB40ALP0C0E4 SPCS2P4-201ENST00000436160 681 ntBASIC15.8■□□□□ 0.12
RAB40ALP0C0E4 CNN2P2-201ENST00000443536 909 ntBASIC15.8■□□□□ 0.12
RAB40ALP0C0E4 CNN2P3-201ENST00000450201 906 ntBASIC15.8■□□□□ 0.12
RAB40ALP0C0E4 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.8■□□□□ 0.12
RAB40ALP0C0E4 IGHV3-62-201ENST00000520057 340 ntBASIC15.8■□□□□ 0.12
RAB40ALP0C0E4 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
RAB40ALP0C0E4 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RAB40ALP0C0E4 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.8■□□□□ 0.12
RAB40ALP0C0E4 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.8■□□□□ 0.12
RAB40ALP0C0E4 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB40ALP0C0E4 AL031055.1-201ENST00000606362 631 ntBASIC15.8■□□□□ 0.12
RAB40ALP0C0E4 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB40ALP0C0E4 AL136317.3-201ENST00000618497 906 ntBASIC15.8■□□□□ 0.12
RAB40ALP0C0E4 AP001059.3-201ENST00000619053 235 ntBASIC15.8■□□□□ 0.12
RAB40ALP0C0E4 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RAB40ALP0C0E4 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
RAB40ALP0C0E4 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.8■□□□□ 0.12
RAB40ALP0C0E4 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RAB40ALP0C0E4 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB40ALP0C0E4 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB40ALP0C0E4 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
RAB40ALP0C0E4 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RAB40ALP0C0E4 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.8■□□□□ 0.12
RAB40ALP0C0E4 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB40ALP0C0E4 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB40ALP0C0E4 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms