Protein–RNA interactions for Protein: P08240

SRPRA, Signal recognition particle receptor subunit alpha, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRAP08240 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.9■□□□□ 0.3
SRPRAP08240 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SRPRAP08240 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SRPRAP08240 MIR346-201ENST00000362234 95 ntBASIC16.9■□□□□ 0.3
SRPRAP08240 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.9■□□□□ 0.3
SRPRAP08240 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.9■□□□□ 0.3
SRPRAP08240 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SRPRAP08240 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SRPRAP08240 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.9■□□□□ 0.3
SRPRAP08240 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.9■□□□□ 0.3
SRPRAP08240 AP000842.3-202ENST00000569238 1080 ntBASIC16.9■□□□□ 0.3
SRPRAP08240 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.9■□□□□ 0.3
SRPRAP08240 AC106028.4-201ENST00000614509 607 ntBASIC16.9■□□□□ 0.3
SRPRAP08240 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.9■□□□□ 0.3
SRPRAP08240 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SRPRAP08240 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.9■□□□□ 0.3
SRPRAP08240 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.9■□□□□ 0.3
SRPRAP08240 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SRPRAP08240 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SRPRAP08240 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
SRPRAP08240 AL645608.8-201ENST00000606034 2086 ntBASIC16.9■□□□□ 0.3
SRPRAP08240 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SRPRAP08240 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SRPRAP08240 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.89■□□□□ 0.3
SRPRAP08240 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
SRPRAP08240 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
SRPRAP08240 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.89■□□□□ 0.29
SRPRAP08240 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SRPRAP08240 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.89■□□□□ 0.29
SRPRAP08240 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SRPRAP08240 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.89■□□□□ 0.29
SRPRAP08240 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SRPRAP08240 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SRPRAP08240 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SRPRAP08240 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SRPRAP08240 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SRPRAP08240 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SRPRAP08240 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SRPRAP08240 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SRPRAP08240 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
SRPRAP08240 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.89■□□□□ 0.29
SRPRAP08240 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.89■□□□□ 0.29
SRPRAP08240 GPS2P2-201ENST00000430745 888 ntBASIC16.89■□□□□ 0.29
SRPRAP08240 HMGN1P19-201ENST00000436976 333 ntBASIC16.89■□□□□ 0.29
SRPRAP08240 RBPMS2P1-201ENST00000437762 623 ntBASIC16.89■□□□□ 0.29
SRPRAP08240 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.89■□□□□ 0.29
SRPRAP08240 AC067863.1-201ENST00000494933 530 ntBASIC16.89■□□□□ 0.29
SRPRAP08240 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.89■□□□□ 0.29
SRPRAP08240 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.89■□□□□ 0.29
SRPRAP08240 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SRPRAP08240 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.89■□□□□ 0.29
SRPRAP08240 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.89■□□□□ 0.29
SRPRAP08240 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
SRPRAP08240 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SRPRAP08240 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SRPRAP08240 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SRPRAP08240 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SRPRAP08240 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SRPRAP08240 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SRPRAP08240 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.89■□□□□ 0.29
SRPRAP08240 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SRPRAP08240 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SRPRAP08240 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
SRPRAP08240 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SRPRAP08240 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.89■□□□□ 0.29
SRPRAP08240 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.89■□□□□ 0.29
SRPRAP08240 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SRPRAP08240 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SRPRAP08240 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.88■□□□□ 0.29
SRPRAP08240 AL391256.1-201ENST00000443260 1855 ntBASIC16.88■□□□□ 0.29
SRPRAP08240 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.88■□□□□ 0.29
SRPRAP08240 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.88■□□□□ 0.29
SRPRAP08240 PKD1P1-201ENST00000458669 6805 ntBASIC16.88■□□□□ 0.29
SRPRAP08240 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
SRPRAP08240 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
SRPRAP08240 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.88■□□□□ 0.29
SRPRAP08240 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.88■□□□□ 0.29
SRPRAP08240 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SRPRAP08240 SNX33P1-201ENST00000592116 1762 ntBASIC16.88■□□□□ 0.29
SRPRAP08240 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SRPRAP08240 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SRPRAP08240 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SRPRAP08240 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SRPRAP08240 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SRPRAP08240 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SRPRAP08240 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SRPRAP08240 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.88■□□□□ 0.29
SRPRAP08240 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.88■□□□□ 0.29
SRPRAP08240 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.88■□□□□ 0.29
SRPRAP08240 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.88■□□□□ 0.29
SRPRAP08240 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SRPRAP08240 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SRPRAP08240 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.88■□□□□ 0.29
SRPRAP08240 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.88■□□□□ 0.29
SRPRAP08240 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SRPRAP08240 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.88■□□□□ 0.29
SRPRAP08240 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.88■□□□□ 0.29
SRPRAP08240 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.88■□□□□ 0.29
SRPRAP08240 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SRPRAP08240 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms