Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL5A2P05997 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL5A2P05997 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL5A2P05997 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC21.73■■□□□ 1.07
COL5A2P05997 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
COL5A2P05997 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL5A2P05997 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
COL5A2P05997 MIR8072-201ENST00000614241 80 ntBASIC21.73■■□□□ 1.07
COL5A2P05997 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC21.73■■□□□ 1.07
COL5A2P05997 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
COL5A2P05997 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
COL5A2P05997 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL5A2P05997 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
COL5A2P05997 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL5A2P05997 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL5A2P05997 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL5A2P05997 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
COL5A2P05997 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
COL5A2P05997 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL5A2P05997 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC21.72■■□□□ 1.07
COL5A2P05997 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
COL5A2P05997 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
COL5A2P05997 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL5A2P05997 MIR6069-201ENST00000620069 79 ntBASIC21.72■■□□□ 1.07
COL5A2P05997 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC21.72■■□□□ 1.07
COL5A2P05997 AC092053.1-201ENST00000605787 1936 ntBASIC21.72■■□□□ 1.07
COL5A2P05997 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
COL5A2P05997 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
COL5A2P05997 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC21.72■■□□□ 1.07
COL5A2P05997 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL5A2P05997 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
COL5A2P05997 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
COL5A2P05997 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC21.72■■□□□ 1.07
COL5A2P05997 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
COL5A2P05997 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL5A2P05997 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL5A2P05997 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL5A2P05997 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL5A2P05997 BOLA2P3-201ENST00000404566 256 ntBASIC21.71■■□□□ 1.07
COL5A2P05997 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
COL5A2P05997 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
COL5A2P05997 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
COL5A2P05997 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
COL5A2P05997 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC21.71■■□□□ 1.07
COL5A2P05997 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
COL5A2P05997 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
COL5A2P05997 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
COL5A2P05997 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC21.71■■□□□ 1.07
COL5A2P05997 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC21.71■■□□□ 1.07
COL5A2P05997 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC21.71■■□□□ 1.07
COL5A2P05997 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL5A2P05997 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC21.71■■□□□ 1.07
COL5A2P05997 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL5A2P05997 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL5A2P05997 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL5A2P05997 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC21.71■■□□□ 1.07
COL5A2P05997 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL5A2P05997 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.71■■□□□ 1.07
COL5A2P05997 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC21.71■■□□□ 1.07
COL5A2P05997 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
COL5A2P05997 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL5A2P05997 CDC14C-201ENST00000428251 1719 ntBASIC21.71■■□□□ 1.07
COL5A2P05997 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC21.71■■□□□ 1.07
COL5A2P05997 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL5A2P05997 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC21.71■■□□□ 1.07
COL5A2P05997 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
COL5A2P05997 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
COL5A2P05997 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL5A2P05997 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
COL5A2P05997 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
COL5A2P05997 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL5A2P05997 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC21.71■■□□□ 1.07
COL5A2P05997 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC21.71■■□□□ 1.07
COL5A2P05997 AC104989.1-201ENST00000519711 778 ntBASIC21.71■■□□□ 1.07
COL5A2P05997 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC21.71■■□□□ 1.07
COL5A2P05997 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
COL5A2P05997 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC21.71■■□□□ 1.07
COL5A2P05997 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
COL5A2P05997 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC21.71■■□□□ 1.07
COL5A2P05997 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
COL5A2P05997 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
COL5A2P05997 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
COL5A2P05997 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
COL5A2P05997 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
COL5A2P05997 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
COL5A2P05997 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
COL5A2P05997 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC21.7■■□□□ 1.06
COL5A2P05997 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
COL5A2P05997 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
COL5A2P05997 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC21.7■■□□□ 1.06
COL5A2P05997 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
COL5A2P05997 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
COL5A2P05997 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
COL5A2P05997 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
COL5A2P05997 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
COL5A2P05997 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC21.7■■□□□ 1.06
COL5A2P05997 USB1-203ENST00000539737 1212 ntTSL 2 BASIC21.7■■□□□ 1.06
COL5A2P05997 MIR4538-201ENST00000581377 78 ntBASIC21.7■■□□□ 1.06
COL5A2P05997 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC21.7■■□□□ 1.06
COL5A2P05997 AC084346.2-201ENST00000607097 949 ntBASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms