Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MBD3O95983 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MBD3O95983 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MBD3O95983 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MBD3O95983 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
MBD3O95983 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.3■□□□□ 0.68
MBD3O95983 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC19.3■□□□□ 0.68
MBD3O95983 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
MBD3O95983 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MBD3O95983 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC19.3■□□□□ 0.68
MBD3O95983 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MBD3O95983 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MBD3O95983 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MBD3O95983 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.3■□□□□ 0.68
MBD3O95983 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.3■□□□□ 0.68
MBD3O95983 NUS1P1-201ENST00000446295 882 ntBASIC19.3■□□□□ 0.68
MBD3O95983 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.3■□□□□ 0.68
MBD3O95983 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.3■□□□□ 0.68
MBD3O95983 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.3■□□□□ 0.68
MBD3O95983 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.3■□□□□ 0.68
MBD3O95983 AC145285.6-201ENST00000604632 637 ntBASIC19.3■□□□□ 0.68
MBD3O95983 AL592071.1-201ENST00000611956 408 ntBASIC19.3■□□□□ 0.68
MBD3O95983 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.3■□□□□ 0.68
MBD3O95983 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
MBD3O95983 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MBD3O95983 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
MBD3O95983 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MBD3O95983 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MBD3O95983 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MBD3O95983 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MBD3O95983 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MBD3O95983 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MBD3O95983 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MBD3O95983 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MBD3O95983 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MBD3O95983 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MBD3O95983 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC19.3■□□□□ 0.68
MBD3O95983 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MBD3O95983 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MBD3O95983 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
MBD3O95983 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
MBD3O95983 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MBD3O95983 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MBD3O95983 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC19.29■□□□□ 0.68
MBD3O95983 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
MBD3O95983 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
MBD3O95983 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC19.29■□□□□ 0.68
MBD3O95983 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC19.29■□□□□ 0.68
MBD3O95983 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MBD3O95983 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MBD3O95983 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MBD3O95983 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
MBD3O95983 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC19.29■□□□□ 0.68
MBD3O95983 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
MBD3O95983 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
MBD3O95983 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.29■□□□□ 0.68
MBD3O95983 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MBD3O95983 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
MBD3O95983 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
MBD3O95983 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.29■□□□□ 0.68
MBD3O95983 AL845331.1-201ENST00000424978 1190 ntBASIC19.29■□□□□ 0.68
MBD3O95983 ATP5G1P1-201ENST00000448724 379 ntBASIC19.29■□□□□ 0.68
MBD3O95983 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
MBD3O95983 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MBD3O95983 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MBD3O95983 BID-213ENST00000615414 2236 ntTSL 5 BASIC19.29■□□□□ 0.68
MBD3O95983 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MBD3O95983 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
MBD3O95983 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
MBD3O95983 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC19.29■□□□□ 0.68
MBD3O95983 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC19.29■□□□□ 0.68
MBD3O95983 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC19.29■□□□□ 0.68
MBD3O95983 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MBD3O95983 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MBD3O95983 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
MBD3O95983 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MBD3O95983 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC19.28■□□□□ 0.68
MBD3O95983 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MBD3O95983 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MBD3O95983 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
MBD3O95983 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
MBD3O95983 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MBD3O95983 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC19.28■□□□□ 0.68
MBD3O95983 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MBD3O95983 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
MBD3O95983 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
MBD3O95983 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MBD3O95983 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC19.28■□□□□ 0.68
MBD3O95983 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MBD3O95983 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
MBD3O95983 CTNS-203ENST00000399306 803 ntTSL 3 BASIC19.28■□□□□ 0.68
MBD3O95983 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
MBD3O95983 SRP19-202ENST00000445150 833 ntTSL 2 BASIC19.28■□□□□ 0.68
MBD3O95983 YBX1P2-201ENST00000489612 999 ntBASIC19.28■□□□□ 0.68
MBD3O95983 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.28■□□□□ 0.68
MBD3O95983 AC009533.2-201ENST00000543664 586 ntBASIC19.28■□□□□ 0.68
MBD3O95983 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MBD3O95983 AC010203.1-204ENST00000548782 407 ntBASIC19.28■□□□□ 0.68
MBD3O95983 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.28■□□□□ 0.68
MBD3O95983 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms