Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
USP1O94782 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
USP1O94782 AC006449.5-201ENST00000610658 2098 ntBASIC17.05■□□□□ 0.32
USP1O94782 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.05■□□□□ 0.32
USP1O94782 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.05■□□□□ 0.32
USP1O94782 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
USP1O94782 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
USP1O94782 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
USP1O94782 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
USP1O94782 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.05■□□□□ 0.32
USP1O94782 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.05■□□□□ 0.32
USP1O94782 KRT18P31-201ENST00000506277 1292 ntBASIC17.05■□□□□ 0.32
USP1O94782 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.05■□□□□ 0.32
USP1O94782 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.05■□□□□ 0.32
USP1O94782 MTDHP3-201ENST00000594186 672 ntBASIC17.05■□□□□ 0.32
USP1O94782 AC013467.2-201ENST00000605472 835 ntBASIC17.05■□□□□ 0.32
USP1O94782 AL355877.3-201ENST00000622820 899 ntBASIC17.05■□□□□ 0.32
USP1O94782 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.05■□□□□ 0.32
USP1O94782 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
USP1O94782 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
USP1O94782 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.05■□□□□ 0.32
USP1O94782 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
USP1O94782 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
USP1O94782 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
USP1O94782 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.05■□□□□ 0.32
USP1O94782 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.05■□□□□ 0.32
USP1O94782 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
USP1O94782 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
USP1O94782 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.05■□□□□ 0.32
USP1O94782 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
USP1O94782 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.05■□□□□ 0.32
USP1O94782 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
USP1O94782 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.04■□□□□ 0.32
USP1O94782 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP1O94782 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.04■□□□□ 0.32
USP1O94782 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP1O94782 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP1O94782 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.04■□□□□ 0.32
USP1O94782 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
USP1O94782 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP1O94782 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
USP1O94782 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP1O94782 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.04■□□□□ 0.32
USP1O94782 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.04■□□□□ 0.32
USP1O94782 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.04■□□□□ 0.32
USP1O94782 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP1O94782 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
USP1O94782 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP1O94782 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
USP1O94782 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.04■□□□□ 0.32
USP1O94782 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
USP1O94782 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.04■□□□□ 0.32
USP1O94782 AL121894.2-201ENST00000602977 491 ntBASIC17.04■□□□□ 0.32
USP1O94782 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
USP1O94782 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP1O94782 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.04■□□□□ 0.32
USP1O94782 AC012313.10-201ENST00000623509 926 ntBASIC17.04■□□□□ 0.32
USP1O94782 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.04■□□□□ 0.32
USP1O94782 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.04■□□□□ 0.32
USP1O94782 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.04■□□□□ 0.32
USP1O94782 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
USP1O94782 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
USP1O94782 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
USP1O94782 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP1O94782 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP1O94782 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP1O94782 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP1O94782 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.04■□□□□ 0.32
USP1O94782 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP1O94782 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
USP1O94782 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP1O94782 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
USP1O94782 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
USP1O94782 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.03■□□□□ 0.32
USP1O94782 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.03■□□□□ 0.32
USP1O94782 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
USP1O94782 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
USP1O94782 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
USP1O94782 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.03■□□□□ 0.32
USP1O94782 AC006538.1-201ENST00000567905 1585 ntBASIC17.03■□□□□ 0.32
USP1O94782 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
USP1O94782 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
USP1O94782 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
USP1O94782 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.03■□□□□ 0.32
USP1O94782 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
USP1O94782 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
USP1O94782 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.03■□□□□ 0.32
USP1O94782 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.03■□□□□ 0.32
USP1O94782 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.03■□□□□ 0.32
USP1O94782 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.03■□□□□ 0.32
USP1O94782 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.03■□□□□ 0.32
USP1O94782 AC091304.2-201ENST00000564639 760 ntBASIC17.03■□□□□ 0.32
USP1O94782 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.03■□□□□ 0.32
USP1O94782 AL139011.1-202ENST00000642063 584 ntBASIC17.03■□□□□ 0.32
USP1O94782 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.03■□□□□ 0.32
USP1O94782 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.03■□□□□ 0.32
USP1O94782 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.03■□□□□ 0.32
USP1O94782 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.03■□□□□ 0.32
USP1O94782 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.03■□□□□ 0.32
USP1O94782 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms