Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.78■□□□□ 0.12
PRAMEF2O60811 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.78■□□□□ 0.12
PRAMEF2O60811 MIR4469-201ENST00000583919 79 ntBASIC15.78■□□□□ 0.12
PRAMEF2O60811 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.78■□□□□ 0.12
PRAMEF2O60811 AC004877.2-201ENST00000623941 599 ntBASIC15.78■□□□□ 0.12
PRAMEF2O60811 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
PRAMEF2O60811 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
PRAMEF2O60811 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRAMEF2O60811 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRAMEF2O60811 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.78■□□□□ 0.12
PRAMEF2O60811 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
PRAMEF2O60811 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRAMEF2O60811 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PRAMEF2O60811 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRAMEF2O60811 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PRAMEF2O60811 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRAMEF2O60811 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PRAMEF2O60811 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PRAMEF2O60811 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
PRAMEF2O60811 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PRAMEF2O60811 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PRAMEF2O60811 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PRAMEF2O60811 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRAMEF2O60811 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PRAMEF2O60811 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.78■□□□□ 0.12
PRAMEF2O60811 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRAMEF2O60811 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PRAMEF2O60811 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PRAMEF2O60811 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
PRAMEF2O60811 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PRAMEF2O60811 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
PRAMEF2O60811 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.77■□□□□ 0.12
PRAMEF2O60811 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.77■□□□□ 0.12
PRAMEF2O60811 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.77■□□□□ 0.12
PRAMEF2O60811 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.77■□□□□ 0.12
PRAMEF2O60811 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.77■□□□□ 0.12
PRAMEF2O60811 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
PRAMEF2O60811 BCAR1-209ENST00000546196 1340 ntBASIC15.77■□□□□ 0.12
PRAMEF2O60811 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.77■□□□□ 0.12
PRAMEF2O60811 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PRAMEF2O60811 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PRAMEF2O60811 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PRAMEF2O60811 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.77■□□□□ 0.12
PRAMEF2O60811 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PRAMEF2O60811 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PRAMEF2O60811 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.77■□□□□ 0.12
PRAMEF2O60811 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PRAMEF2O60811 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.77■□□□□ 0.12
PRAMEF2O60811 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.12
PRAMEF2O60811 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.77■□□□□ 0.12
PRAMEF2O60811 MKNK2P1-201ENST00000437526 628 ntBASIC15.77■□□□□ 0.12
PRAMEF2O60811 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
PRAMEF2O60811 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
PRAMEF2O60811 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PRAMEF2O60811 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.77■□□□□ 0.12
PRAMEF2O60811 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.77■□□□□ 0.12
PRAMEF2O60811 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.77■□□□□ 0.12
PRAMEF2O60811 PDPK2P-202ENST00000562415 1191 ntBASIC15.77■□□□□ 0.12
PRAMEF2O60811 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.77■□□□□ 0.12
PRAMEF2O60811 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.77■□□□□ 0.12
PRAMEF2O60811 OR7E47P-204ENST00000575924 449 ntBASIC15.77■□□□□ 0.12
PRAMEF2O60811 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.77■□□□□ 0.12
PRAMEF2O60811 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.77■□□□□ 0.12
PRAMEF2O60811 AL596442.2-201ENST00000610240 980 ntBASIC15.77■□□□□ 0.12
PRAMEF2O60811 AC007064.4-201ENST00000637740 555 ntBASIC15.77■□□□□ 0.12
PRAMEF2O60811 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PRAMEF2O60811 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PRAMEF2O60811 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PRAMEF2O60811 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PRAMEF2O60811 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PRAMEF2O60811 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PRAMEF2O60811 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PRAMEF2O60811 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.77■□□□□ 0.11
PRAMEF2O60811 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
PRAMEF2O60811 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PRAMEF2O60811 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PRAMEF2O60811 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PRAMEF2O60811 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.76■□□□□ 0.11
PRAMEF2O60811 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
PRAMEF2O60811 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
PRAMEF2O60811 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.76■□□□□ 0.11
PRAMEF2O60811 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PRAMEF2O60811 PCDHB17P-201ENST00000539533 2393 ntBASIC15.76■□□□□ 0.11
PRAMEF2O60811 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.76■□□□□ 0.11
PRAMEF2O60811 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.76■□□□□ 0.11
PRAMEF2O60811 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PRAMEF2O60811 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PRAMEF2O60811 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PRAMEF2O60811 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
PRAMEF2O60811 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PRAMEF2O60811 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PRAMEF2O60811 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PRAMEF2O60811 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.76■□□□□ 0.11
PRAMEF2O60811 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.76■□□□□ 0.11
PRAMEF2O60811 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.76■□□□□ 0.11
PRAMEF2O60811 RHOQP3-201ENST00000437982 621 ntBASIC15.76■□□□□ 0.11
PRAMEF2O60811 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.76■□□□□ 0.11
PRAMEF2O60811 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.76■□□□□ 0.11
PRAMEF2O60811 SNHG9-202ENST00000564014 471 ntBASIC15.76■□□□□ 0.11
PRAMEF2O60811 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms