Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LCMT2O60294 HLA-A-202ENST00000376806 1854 ntBASIC16.05■□□□□ 0.16
LCMT2O60294 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LCMT2O60294 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LCMT2O60294 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.05■□□□□ 0.16
LCMT2O60294 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LCMT2O60294 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.05■□□□□ 0.16
LCMT2O60294 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.05■□□□□ 0.16
LCMT2O60294 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
LCMT2O60294 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LCMT2O60294 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
LCMT2O60294 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.05■□□□□ 0.16
LCMT2O60294 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
LCMT2O60294 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LCMT2O60294 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LCMT2O60294 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.05■□□□□ 0.16
LCMT2O60294 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LCMT2O60294 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LCMT2O60294 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LCMT2O60294 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.05■□□□□ 0.16
LCMT2O60294 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LCMT2O60294 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.05■□□□□ 0.16
LCMT2O60294 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LCMT2O60294 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.05■□□□□ 0.16
LCMT2O60294 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.05■□□□□ 0.16
LCMT2O60294 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LCMT2O60294 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.05■□□□□ 0.16
LCMT2O60294 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LCMT2O60294 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
LCMT2O60294 AL645728.2-201ENST00000641974 660 ntBASIC16.05■□□□□ 0.16
LCMT2O60294 AL139011.1-202ENST00000642063 584 ntBASIC16.05■□□□□ 0.16
LCMT2O60294 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.05■□□□□ 0.16
LCMT2O60294 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LCMT2O60294 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LCMT2O60294 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LCMT2O60294 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.05■□□□□ 0.16
LCMT2O60294 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LCMT2O60294 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LCMT2O60294 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LCMT2O60294 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
LCMT2O60294 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LCMT2O60294 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LCMT2O60294 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
LCMT2O60294 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LCMT2O60294 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
LCMT2O60294 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
LCMT2O60294 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
LCMT2O60294 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LCMT2O60294 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
LCMT2O60294 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
LCMT2O60294 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LCMT2O60294 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LCMT2O60294 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LCMT2O60294 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
LCMT2O60294 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
LCMT2O60294 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.04■□□□□ 0.16
LCMT2O60294 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LCMT2O60294 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
LCMT2O60294 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LCMT2O60294 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.04■□□□□ 0.16
LCMT2O60294 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.04■□□□□ 0.16
LCMT2O60294 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
LCMT2O60294 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.04■□□□□ 0.16
LCMT2O60294 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.04■□□□□ 0.16
LCMT2O60294 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.04■□□□□ 0.16
LCMT2O60294 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.04■□□□□ 0.16
LCMT2O60294 AP001350.2-201ENST00000625104 1094 ntBASIC16.04■□□□□ 0.16
LCMT2O60294 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LCMT2O60294 AC099398.1-201ENST00000567919 2776 ntBASIC16.04■□□□□ 0.16
LCMT2O60294 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LCMT2O60294 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.04■□□□□ 0.16
LCMT2O60294 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.04■□□□□ 0.16
LCMT2O60294 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.04■□□□□ 0.16
LCMT2O60294 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.04■□□□□ 0.16
LCMT2O60294 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LCMT2O60294 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
LCMT2O60294 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LCMT2O60294 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LCMT2O60294 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LCMT2O60294 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LCMT2O60294 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.04■□□□□ 0.16
LCMT2O60294 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.04■□□□□ 0.16
LCMT2O60294 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.04■□□□□ 0.16
LCMT2O60294 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
LCMT2O60294 PCDHA14-201ENST00000506751 2298 ntBASIC16.03■□□□□ 0.16
LCMT2O60294 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCMT2O60294 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCMT2O60294 KRT8P39-201ENST00000396270 1433 ntBASIC16.03■□□□□ 0.16
LCMT2O60294 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCMT2O60294 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCMT2O60294 AC084018.2-201ENST00000613093 2607 ntBASIC16.03■□□□□ 0.16
LCMT2O60294 AL512652.2-201ENST00000625156 1716 ntBASIC16.03■□□□□ 0.16
LCMT2O60294 PMS2P7-201ENST00000506558 1336 ntBASIC16.03■□□□□ 0.16
LCMT2O60294 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
LCMT2O60294 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LCMT2O60294 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.03■□□□□ 0.16
LCMT2O60294 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.03■□□□□ 0.16
LCMT2O60294 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.03■□□□□ 0.16
LCMT2O60294 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.03■□□□□ 0.16
LCMT2O60294 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms