Protein–RNA interactions for Protein: O43812

DUX1, Double homeobox protein 1, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX1O43812 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.03■□□□□ 0.16
DUX1O43812 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
DUX1O43812 MIR943-201ENST00000401286 94 ntBASIC16.03■□□□□ 0.16
DUX1O43812 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
DUX1O43812 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.03■□□□□ 0.16
DUX1O43812 COX20P2-201ENST00000452636 358 ntBASIC16.03■□□□□ 0.16
DUX1O43812 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.03■□□□□ 0.16
DUX1O43812 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.03■□□□□ 0.16
DUX1O43812 AP002490.2-201ENST00000524791 560 ntBASIC16.03■□□□□ 0.16
DUX1O43812 DUX4L27-201ENST00000554796 1261 ntBASIC16.03■□□□□ 0.16
DUX1O43812 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.03■□□□□ 0.16
DUX1O43812 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
DUX1O43812 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
DUX1O43812 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.03■□□□□ 0.16
DUX1O43812 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.03■□□□□ 0.16
DUX1O43812 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.03■□□□□ 0.16
DUX1O43812 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
DUX1O43812 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
DUX1O43812 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.03■□□□□ 0.16
DUX1O43812 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
DUX1O43812 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.03■□□□□ 0.16
DUX1O43812 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
DUX1O43812 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.02■□□□□ 0.16
DUX1O43812 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
DUX1O43812 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
DUX1O43812 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
DUX1O43812 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
DUX1O43812 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
DUX1O43812 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
DUX1O43812 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
DUX1O43812 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
DUX1O43812 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
DUX1O43812 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
DUX1O43812 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
DUX1O43812 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
DUX1O43812 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.02■□□□□ 0.16
DUX1O43812 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
DUX1O43812 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.02■□□□□ 0.16
DUX1O43812 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
DUX1O43812 BASP1P1-201ENST00000430708 665 ntBASIC16.02■□□□□ 0.16
DUX1O43812 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.02■□□□□ 0.16
DUX1O43812 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.02■□□□□ 0.16
DUX1O43812 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.02■□□□□ 0.16
DUX1O43812 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.02■□□□□ 0.16
DUX1O43812 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.02■□□□□ 0.16
DUX1O43812 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.02■□□□□ 0.16
DUX1O43812 AC140878.1-201ENST00000565277 250 ntBASIC16.02■□□□□ 0.16
DUX1O43812 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.02■□□□□ 0.16
DUX1O43812 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.02■□□□□ 0.16
DUX1O43812 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
DUX1O43812 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
DUX1O43812 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
DUX1O43812 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
DUX1O43812 CROCCP1-201ENST00000426910 5675 ntBASIC16.02■□□□□ 0.15
DUX1O43812 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
DUX1O43812 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
DUX1O43812 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
DUX1O43812 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
DUX1O43812 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
DUX1O43812 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
DUX1O43812 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
DUX1O43812 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
DUX1O43812 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
DUX1O43812 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.01■□□□□ 0.15
DUX1O43812 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
DUX1O43812 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
DUX1O43812 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
DUX1O43812 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.01■□□□□ 0.15
DUX1O43812 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
DUX1O43812 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.01■□□□□ 0.15
DUX1O43812 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.01■□□□□ 0.15
DUX1O43812 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
DUX1O43812 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.01■□□□□ 0.15
DUX1O43812 AC008677.1-201ENST00000519230 1561 ntBASIC16.01■□□□□ 0.15
DUX1O43812 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
DUX1O43812 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
DUX1O43812 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
DUX1O43812 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
DUX1O43812 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
DUX1O43812 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
DUX1O43812 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.01■□□□□ 0.15
DUX1O43812 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.01■□□□□ 0.15
DUX1O43812 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.01■□□□□ 0.15
DUX1O43812 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.01■□□□□ 0.15
DUX1O43812 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
DUX1O43812 PRYP6-201ENST00000514804 343 ntBASIC16.01■□□□□ 0.15
DUX1O43812 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.01■□□□□ 0.15
DUX1O43812 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.01■□□□□ 0.15
DUX1O43812 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.01■□□□□ 0.15
DUX1O43812 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
DUX1O43812 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
DUX1O43812 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
DUX1O43812 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
DUX1O43812 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
DUX1O43812 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
DUX1O43812 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
DUX1O43812 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
DUX1O43812 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
DUX1O43812 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
DUX1O43812 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms