Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.41■□□□□ 0.38
MSI1O43347 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.41■□□□□ 0.38
MSI1O43347 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.41■□□□□ 0.38
MSI1O43347 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.41■□□□□ 0.38
MSI1O43347 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.41■□□□□ 0.38
MSI1O43347 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.41■□□□□ 0.38
MSI1O43347 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.41■□□□□ 0.38
MSI1O43347 AC013467.2-201ENST00000605472 835 ntBASIC17.41■□□□□ 0.38
MSI1O43347 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MSI1O43347 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
MSI1O43347 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MSI1O43347 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.41■□□□□ 0.38
MSI1O43347 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
MSI1O43347 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
MSI1O43347 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.41■□□□□ 0.38
MSI1O43347 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
MSI1O43347 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MSI1O43347 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MSI1O43347 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.41■□□□□ 0.38
MSI1O43347 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.41■□□□□ 0.38
MSI1O43347 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MSI1O43347 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MSI1O43347 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.41■□□□□ 0.38
MSI1O43347 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
MSI1O43347 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.4■□□□□ 0.38
MSI1O43347 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MSI1O43347 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.4■□□□□ 0.38
MSI1O43347 AC009053.2-201ENST00000563701 2365 ntBASIC17.4■□□□□ 0.38
MSI1O43347 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MSI1O43347 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MSI1O43347 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
MSI1O43347 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MSI1O43347 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.4■□□□□ 0.38
MSI1O43347 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.4■□□□□ 0.38
MSI1O43347 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.4■□□□□ 0.38
MSI1O43347 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MSI1O43347 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MSI1O43347 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MSI1O43347 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
MSI1O43347 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MSI1O43347 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.4■□□□□ 0.38
MSI1O43347 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.4■□□□□ 0.38
MSI1O43347 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MSI1O43347 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MSI1O43347 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
MSI1O43347 ADH5P3-201ENST00000433842 1137 ntBASIC17.4■□□□□ 0.38
MSI1O43347 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MSI1O43347 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MSI1O43347 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
MSI1O43347 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.4■□□□□ 0.38
MSI1O43347 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.4■□□□□ 0.38
MSI1O43347 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
MSI1O43347 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
MSI1O43347 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MSI1O43347 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MSI1O43347 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MSI1O43347 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
MSI1O43347 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
MSI1O43347 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MSI1O43347 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.4■□□□□ 0.38
MSI1O43347 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.4■□□□□ 0.38
MSI1O43347 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MSI1O43347 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
MSI1O43347 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
MSI1O43347 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.4■□□□□ 0.38
MSI1O43347 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
MSI1O43347 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.4■□□□□ 0.38
MSI1O43347 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MSI1O43347 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
MSI1O43347 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MSI1O43347 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MSI1O43347 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
MSI1O43347 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
MSI1O43347 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.4■□□□□ 0.38
MSI1O43347 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
MSI1O43347 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
MSI1O43347 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
MSI1O43347 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.39■□□□□ 0.38
MSI1O43347 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.39■□□□□ 0.37
MSI1O43347 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MSI1O43347 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.39■□□□□ 0.37
MSI1O43347 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.39■□□□□ 0.37
MSI1O43347 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
MSI1O43347 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MSI1O43347 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
MSI1O43347 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MSI1O43347 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MSI1O43347 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
MSI1O43347 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
MSI1O43347 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MSI1O43347 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
MSI1O43347 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MSI1O43347 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
MSI1O43347 AL355306.1-201ENST00000415580 579 ntBASIC17.39■□□□□ 0.37
MSI1O43347 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.39■□□□□ 0.37
MSI1O43347 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.39■□□□□ 0.37
MSI1O43347 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.39■□□□□ 0.37
MSI1O43347 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MSI1O43347 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.39■□□□□ 0.37
MSI1O43347 AL596442.2-201ENST00000610240 980 ntBASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms