Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.94■□□□□ 0.14
UPK1AO00322 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.94■□□□□ 0.14
UPK1AO00322 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.94■□□□□ 0.14
UPK1AO00322 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.94■□□□□ 0.14
UPK1AO00322 TERC-201ENST00000602385 541 ntBASIC15.94■□□□□ 0.14
UPK1AO00322 AL121912.1-201ENST00000603683 238 ntBASIC15.94■□□□□ 0.14
UPK1AO00322 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.94■□□□□ 0.14
UPK1AO00322 TP73-AS1-207ENST00000624167 988 ntBASIC15.94■□□□□ 0.14
UPK1AO00322 AC107918.4-202ENST00000641623 219 ntBASIC15.94■□□□□ 0.14
UPK1AO00322 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
UPK1AO00322 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
UPK1AO00322 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
UPK1AO00322 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
UPK1AO00322 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
UPK1AO00322 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
UPK1AO00322 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
UPK1AO00322 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
UPK1AO00322 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
UPK1AO00322 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.94■□□□□ 0.14
UPK1AO00322 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
UPK1AO00322 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
UPK1AO00322 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.94■□□□□ 0.14
UPK1AO00322 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
UPK1AO00322 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.94■□□□□ 0.14
UPK1AO00322 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
UPK1AO00322 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.93■□□□□ 0.14
UPK1AO00322 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.93■□□□□ 0.14
UPK1AO00322 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
UPK1AO00322 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
UPK1AO00322 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
UPK1AO00322 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
UPK1AO00322 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
UPK1AO00322 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.93■□□□□ 0.14
UPK1AO00322 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
UPK1AO00322 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
UPK1AO00322 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
UPK1AO00322 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
UPK1AO00322 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.93■□□□□ 0.14
UPK1AO00322 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
UPK1AO00322 LAGE3P1-201ENST00000425356 484 ntBASIC15.93■□□□□ 0.14
UPK1AO00322 AL450487.1-201ENST00000426799 995 ntBASIC15.93■□□□□ 0.14
UPK1AO00322 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
UPK1AO00322 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
UPK1AO00322 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
UPK1AO00322 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
UPK1AO00322 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.93■□□□□ 0.14
UPK1AO00322 RN7SL510P-201ENST00000581311 263 ntBASIC15.93■□□□□ 0.14
UPK1AO00322 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.93■□□□□ 0.14
UPK1AO00322 AL691432.3-201ENST00000621860 400 ntBASIC15.93■□□□□ 0.14
UPK1AO00322 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.93■□□□□ 0.14
UPK1AO00322 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
UPK1AO00322 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.93■□□□□ 0.14
UPK1AO00322 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
UPK1AO00322 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
UPK1AO00322 HYMAI-201ENST00000635591 3347 ntBASIC15.93■□□□□ 0.14
UPK1AO00322 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.93■□□□□ 0.14
UPK1AO00322 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
UPK1AO00322 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.93■□□□□ 0.14
UPK1AO00322 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
UPK1AO00322 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
UPK1AO00322 PKD1P1-201ENST00000458669 6805 ntBASIC15.93■□□□□ 0.14
UPK1AO00322 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
UPK1AO00322 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
UPK1AO00322 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.93■□□□□ 0.14
UPK1AO00322 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
UPK1AO00322 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
UPK1AO00322 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
UPK1AO00322 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
UPK1AO00322 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.93■□□□□ 0.14
UPK1AO00322 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.93■□□□□ 0.14
UPK1AO00322 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.93■□□□□ 0.14
UPK1AO00322 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.93■□□□□ 0.14
UPK1AO00322 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.93■□□□□ 0.14
UPK1AO00322 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
UPK1AO00322 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.92■□□□□ 0.14
UPK1AO00322 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.92■□□□□ 0.14
UPK1AO00322 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
UPK1AO00322 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
UPK1AO00322 AC006504.4-201ENST00000592118 1568 ntBASIC15.92■□□□□ 0.14
UPK1AO00322 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
UPK1AO00322 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
UPK1AO00322 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.92■□□□□ 0.14
UPK1AO00322 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
UPK1AO00322 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.92■□□□□ 0.14
UPK1AO00322 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
UPK1AO00322 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
UPK1AO00322 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
UPK1AO00322 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.92■□□□□ 0.14
UPK1AO00322 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.92■□□□□ 0.14
UPK1AO00322 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.92■□□□□ 0.14
UPK1AO00322 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
UPK1AO00322 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
UPK1AO00322 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
UPK1AO00322 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.92■□□□□ 0.14
UPK1AO00322 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
UPK1AO00322 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
UPK1AO00322 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.92■□□□□ 0.14
UPK1AO00322 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.92■□□□□ 0.14
UPK1AO00322 RPS2P1-201ENST00000434010 821 ntBASIC15.92■□□□□ 0.14
UPK1AO00322 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms