Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 RNF126P1-202ENST00000569893 925 ntBASIC16.06■□□□□ 0.16
PDLIM1O00151 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.06■□□□□ 0.16
PDLIM1O00151 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
PDLIM1O00151 AC011498.5-201ENST00000592027 486 ntBASIC16.06■□□□□ 0.16
PDLIM1O00151 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PDLIM1O00151 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.06■□□□□ 0.16
PDLIM1O00151 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
PDLIM1O00151 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.06■□□□□ 0.16
PDLIM1O00151 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDLIM1O00151 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PDLIM1O00151 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDLIM1O00151 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PDLIM1O00151 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.06■□□□□ 0.16
PDLIM1O00151 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.06■□□□□ 0.16
PDLIM1O00151 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDLIM1O00151 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PDLIM1O00151 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.06■□□□□ 0.16
PDLIM1O00151 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PDLIM1O00151 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
PDLIM1O00151 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDLIM1O00151 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.05■□□□□ 0.16
PDLIM1O00151 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDLIM1O00151 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PDLIM1O00151 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDLIM1O00151 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDLIM1O00151 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
PDLIM1O00151 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PDLIM1O00151 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDLIM1O00151 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PDLIM1O00151 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDLIM1O00151 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
PDLIM1O00151 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDLIM1O00151 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDLIM1O00151 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDLIM1O00151 IGHGP-201ENST00000390555 1178 ntBASIC16.05■□□□□ 0.16
PDLIM1O00151 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.05■□□□□ 0.16
PDLIM1O00151 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PDLIM1O00151 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.05■□□□□ 0.16
PDLIM1O00151 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.05■□□□□ 0.16
PDLIM1O00151 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.05■□□□□ 0.16
PDLIM1O00151 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.05■□□□□ 0.16
PDLIM1O00151 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PDLIM1O00151 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.05■□□□□ 0.16
PDLIM1O00151 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.05■□□□□ 0.16
PDLIM1O00151 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.05■□□□□ 0.16
PDLIM1O00151 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PDLIM1O00151 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDLIM1O00151 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.05■□□□□ 0.16
PDLIM1O00151 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PDLIM1O00151 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.05■□□□□ 0.16
PDLIM1O00151 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDLIM1O00151 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.05■□□□□ 0.16
PDLIM1O00151 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDLIM1O00151 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.04■□□□□ 0.16
PDLIM1O00151 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PDLIM1O00151 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDLIM1O00151 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PDLIM1O00151 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.04■□□□□ 0.16
PDLIM1O00151 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.04■□□□□ 0.16
PDLIM1O00151 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDLIM1O00151 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDLIM1O00151 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDLIM1O00151 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PDLIM1O00151 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDLIM1O00151 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC16.04■□□□□ 0.16
PDLIM1O00151 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC16.04■□□□□ 0.16
PDLIM1O00151 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PDLIM1O00151 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
PDLIM1O00151 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDLIM1O00151 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.04■□□□□ 0.16
PDLIM1O00151 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
PDLIM1O00151 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PDLIM1O00151 AC002558.1-201ENST00000488906 803 ntBASIC16.04■□□□□ 0.16
PDLIM1O00151 AP003733.1-201ENST00000491725 852 ntBASIC16.04■□□□□ 0.16
PDLIM1O00151 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.04■□□□□ 0.16
PDLIM1O00151 AL390719.2-201ENST00000606993 987 ntBASIC16.04■□□□□ 0.16
PDLIM1O00151 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
PDLIM1O00151 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.04■□□□□ 0.16
PDLIM1O00151 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.04■□□□□ 0.16
PDLIM1O00151 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PDLIM1O00151 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDLIM1O00151 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.04■□□□□ 0.16
PDLIM1O00151 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDLIM1O00151 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDLIM1O00151 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.04■□□□□ 0.16
PDLIM1O00151 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.04■□□□□ 0.16
PDLIM1O00151 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.04■□□□□ 0.16
PDLIM1O00151 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PDLIM1O00151 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDLIM1O00151 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PDLIM1O00151 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
PDLIM1O00151 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDLIM1O00151 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDLIM1O00151 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDLIM1O00151 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.03■□□□□ 0.16
PDLIM1O00151 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDLIM1O00151 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDLIM1O00151 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.03■□□□□ 0.16
PDLIM1O00151 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PDLIM1O00151 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms