Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM49D1C9J1S8 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM49D1C9J1S8 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM49D1C9J1S8 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
TRIM49D1C9J1S8 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM49D1C9J1S8 AC243591.1-201ENST00000452967 1364 ntBASIC16.89■□□□□ 0.29
TRIM49D1C9J1S8 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
TRIM49D1C9J1S8 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM49D1C9J1S8 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.88■□□□□ 0.29
TRIM49D1C9J1S8 LINC00554-201ENST00000564841 3011 ntBASIC16.88■□□□□ 0.29
TRIM49D1C9J1S8 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.88■□□□□ 0.29
TRIM49D1C9J1S8 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
TRIM49D1C9J1S8 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM49D1C9J1S8 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.88■□□□□ 0.29
TRIM49D1C9J1S8 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM49D1C9J1S8 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM49D1C9J1S8 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM49D1C9J1S8 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM49D1C9J1S8 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.88■□□□□ 0.29
TRIM49D1C9J1S8 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.88■□□□□ 0.29
TRIM49D1C9J1S8 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM49D1C9J1S8 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM49D1C9J1S8 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM49D1C9J1S8 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM49D1C9J1S8 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.88■□□□□ 0.29
TRIM49D1C9J1S8 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.88■□□□□ 0.29
TRIM49D1C9J1S8 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM49D1C9J1S8 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.88■□□□□ 0.29
TRIM49D1C9J1S8 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.88■□□□□ 0.29
TRIM49D1C9J1S8 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM49D1C9J1S8 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM49D1C9J1S8 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM49D1C9J1S8 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
TRIM49D1C9J1S8 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
TRIM49D1C9J1S8 TSSC2-201ENST00000450217 709 ntBASIC16.88■□□□□ 0.29
TRIM49D1C9J1S8 AC013467.2-201ENST00000605472 835 ntBASIC16.88■□□□□ 0.29
TRIM49D1C9J1S8 AC114341.1-201ENST00000618070 349 ntBASIC16.88■□□□□ 0.29
TRIM49D1C9J1S8 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
TRIM49D1C9J1S8 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM49D1C9J1S8 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM49D1C9J1S8 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.88■□□□□ 0.29
TRIM49D1C9J1S8 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.88■□□□□ 0.29
TRIM49D1C9J1S8 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.88■□□□□ 0.29
TRIM49D1C9J1S8 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM49D1C9J1S8 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
TRIM49D1C9J1S8 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM49D1C9J1S8 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM49D1C9J1S8 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TRIM49D1C9J1S8 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM49D1C9J1S8 SIGLEC16-201ENST00000599858 1437 ntBASIC16.87■□□□□ 0.29
TRIM49D1C9J1S8 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM49D1C9J1S8 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.87■□□□□ 0.29
TRIM49D1C9J1S8 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TRIM49D1C9J1S8 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM49D1C9J1S8 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.87■□□□□ 0.29
TRIM49D1C9J1S8 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM49D1C9J1S8 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.87■□□□□ 0.29
TRIM49D1C9J1S8 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM49D1C9J1S8 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM49D1C9J1S8 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM49D1C9J1S8 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.87■□□□□ 0.29
TRIM49D1C9J1S8 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.87■□□□□ 0.29
TRIM49D1C9J1S8 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM49D1C9J1S8 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM49D1C9J1S8 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM49D1C9J1S8 IGHV3-47-201ENST00000425060 335 ntBASIC16.87■□□□□ 0.29
TRIM49D1C9J1S8 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM49D1C9J1S8 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM49D1C9J1S8 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
TRIM49D1C9J1S8 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.87■□□□□ 0.29
TRIM49D1C9J1S8 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.87■□□□□ 0.29
TRIM49D1C9J1S8 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.87■□□□□ 0.29
TRIM49D1C9J1S8 AL139011.1-202ENST00000642063 584 ntBASIC16.87■□□□□ 0.29
TRIM49D1C9J1S8 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.87■□□□□ 0.29
TRIM49D1C9J1S8 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM49D1C9J1S8 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM49D1C9J1S8 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.87■□□□□ 0.29
TRIM49D1C9J1S8 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.87■□□□□ 0.29
TRIM49D1C9J1S8 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM49D1C9J1S8 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM49D1C9J1S8 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM49D1C9J1S8 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM49D1C9J1S8 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.87■□□□□ 0.29
TRIM49D1C9J1S8 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.87■□□□□ 0.29
TRIM49D1C9J1S8 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM49D1C9J1S8 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
TRIM49D1C9J1S8 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
TRIM49D1C9J1S8 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM49D1C9J1S8 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM49D1C9J1S8 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM49D1C9J1S8 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM49D1C9J1S8 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM49D1C9J1S8 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM49D1C9J1S8 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
TRIM49D1C9J1S8 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.86■□□□□ 0.29
TRIM49D1C9J1S8 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM49D1C9J1S8 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM49D1C9J1S8 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
TRIM49D1C9J1S8 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM49D1C9J1S8 TMPOP1-202ENST00000424642 1267 ntBASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms