Protein–RNA interactions for Protein: A4UGR9

XIRP2, Xin actin-binding repeat-containing protein 2, humanhuman

Predictions only

Length 3,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XIRP2A4UGR9 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
XIRP2A4UGR9 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
XIRP2A4UGR9 MIR1247-201ENST00000408206 136 ntBASIC17.27■□□□□ 0.36
XIRP2A4UGR9 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC17.27■□□□□ 0.36
XIRP2A4UGR9 AC007551.1-201ENST00000457394 519 ntBASIC17.27■□□□□ 0.36
XIRP2A4UGR9 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
XIRP2A4UGR9 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC17.27■□□□□ 0.36
XIRP2A4UGR9 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC17.27■□□□□ 0.36
XIRP2A4UGR9 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
XIRP2A4UGR9 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
XIRP2A4UGR9 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.27■□□□□ 0.36
XIRP2A4UGR9 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
XIRP2A4UGR9 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
XIRP2A4UGR9 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
XIRP2A4UGR9 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
XIRP2A4UGR9 AC092068.3-201ENST00000587894 2016 ntBASIC17.27■□□□□ 0.35
XIRP2A4UGR9 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
XIRP2A4UGR9 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.35
XIRP2A4UGR9 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC17.27■□□□□ 0.35
XIRP2A4UGR9 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC17.27■□□□□ 0.35
XIRP2A4UGR9 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC17.27■□□□□ 0.35
XIRP2A4UGR9 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC17.27■□□□□ 0.35
XIRP2A4UGR9 RN7SL219P-201ENST00000582872 296 ntBASIC17.27■□□□□ 0.35
XIRP2A4UGR9 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC17.27■□□□□ 0.35
XIRP2A4UGR9 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC17.27■□□□□ 0.35
XIRP2A4UGR9 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
XIRP2A4UGR9 PP12613-201ENST00000424958 2230 ntBASIC17.27■□□□□ 0.35
XIRP2A4UGR9 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
XIRP2A4UGR9 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.27■□□□□ 0.35
XIRP2A4UGR9 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
XIRP2A4UGR9 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
XIRP2A4UGR9 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
XIRP2A4UGR9 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
XIRP2A4UGR9 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC17.26■□□□□ 0.35
XIRP2A4UGR9 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC17.26■□□□□ 0.35
XIRP2A4UGR9 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
XIRP2A4UGR9 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
XIRP2A4UGR9 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC17.26■□□□□ 0.35
XIRP2A4UGR9 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
XIRP2A4UGR9 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.26■□□□□ 0.35
XIRP2A4UGR9 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
XIRP2A4UGR9 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
XIRP2A4UGR9 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
XIRP2A4UGR9 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
XIRP2A4UGR9 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
XIRP2A4UGR9 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
XIRP2A4UGR9 PAM16-204ENST00000571941 674 ntTSL 3 BASIC17.26■□□□□ 0.35
XIRP2A4UGR9 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC17.26■□□□□ 0.35
XIRP2A4UGR9 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.26■□□□□ 0.35
XIRP2A4UGR9 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
XIRP2A4UGR9 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
XIRP2A4UGR9 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
XIRP2A4UGR9 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
XIRP2A4UGR9 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
XIRP2A4UGR9 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC17.26■□□□□ 0.35
XIRP2A4UGR9 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC17.26■□□□□ 0.35
XIRP2A4UGR9 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
XIRP2A4UGR9 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
XIRP2A4UGR9 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.25■□□□□ 0.35
XIRP2A4UGR9 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.25■□□□□ 0.35
XIRP2A4UGR9 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
XIRP2A4UGR9 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
XIRP2A4UGR9 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
XIRP2A4UGR9 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
XIRP2A4UGR9 OSM-203ENST00000403463 464 ntTSL 3 BASIC17.25■□□□□ 0.35
XIRP2A4UGR9 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC17.25■□□□□ 0.35
XIRP2A4UGR9 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
XIRP2A4UGR9 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
XIRP2A4UGR9 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
XIRP2A4UGR9 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
XIRP2A4UGR9 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
XIRP2A4UGR9 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
XIRP2A4UGR9 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
XIRP2A4UGR9 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
XIRP2A4UGR9 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
XIRP2A4UGR9 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
XIRP2A4UGR9 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
XIRP2A4UGR9 STX1A-203ENST00000395155 783 ntTSL 2 BASIC17.25■□□□□ 0.35
XIRP2A4UGR9 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.25■□□□□ 0.35
XIRP2A4UGR9 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
XIRP2A4UGR9 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC17.25■□□□□ 0.35
XIRP2A4UGR9 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC17.25■□□□□ 0.35
XIRP2A4UGR9 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC17.25■□□□□ 0.35
XIRP2A4UGR9 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
XIRP2A4UGR9 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
XIRP2A4UGR9 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
XIRP2A4UGR9 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
XIRP2A4UGR9 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
XIRP2A4UGR9 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
XIRP2A4UGR9 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
XIRP2A4UGR9 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
XIRP2A4UGR9 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
XIRP2A4UGR9 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC17.25■□□□□ 0.35
XIRP2A4UGR9 AC114501.2-201ENST00000439631 535 ntBASIC17.25■□□□□ 0.35
XIRP2A4UGR9 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.25■□□□□ 0.35
XIRP2A4UGR9 AL589987.1-201ENST00000453380 819 ntBASIC17.25■□□□□ 0.35
XIRP2A4UGR9 IGHJ2P-201ENST00000454480 60 ntBASIC17.25■□□□□ 0.35
XIRP2A4UGR9 MIR4706-201ENST00000582134 82 ntBASIC17.25■□□□□ 0.35
XIRP2A4UGR9 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC17.25■□□□□ 0.35
XIRP2A4UGR9 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms