Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
HFM1A2PYH4 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
HFM1A2PYH4 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
HFM1A2PYH4 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
HFM1A2PYH4 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC24.58■■□□□ 1.52
HFM1A2PYH4 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
HFM1A2PYH4 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
HFM1A2PYH4 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC24.57■■□□□ 1.52
HFM1A2PYH4 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC24.57■■□□□ 1.52
HFM1A2PYH4 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC24.57■■□□□ 1.52
HFM1A2PYH4 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
HFM1A2PYH4 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
HFM1A2PYH4 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
HFM1A2PYH4 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC24.57■■□□□ 1.52
HFM1A2PYH4 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC24.57■■□□□ 1.52
HFM1A2PYH4 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
HFM1A2PYH4 CALY-203ENST00000368558 825 ntTSL 5 BASIC24.57■■□□□ 1.52
HFM1A2PYH4 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
HFM1A2PYH4 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC24.57■■□□□ 1.52
HFM1A2PYH4 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC24.57■■□□□ 1.52
HFM1A2PYH4 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC24.57■■□□□ 1.52
HFM1A2PYH4 AC005498.2-205ENST00000593218 784 ntBASIC24.57■■□□□ 1.52
HFM1A2PYH4 AC011467.4-201ENST00000594891 528 ntBASIC24.57■■□□□ 1.52
HFM1A2PYH4 AC007967.4-201ENST00000614700 386 ntBASIC24.57■■□□□ 1.52
HFM1A2PYH4 AC093512.1-201ENST00000617969 520 ntBASIC24.57■■□□□ 1.52
HFM1A2PYH4 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
HFM1A2PYH4 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC24.57■■□□□ 1.52
HFM1A2PYH4 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
HFM1A2PYH4 FLJ38576-201ENST00000623820 2459 ntBASIC24.57■■□□□ 1.52
HFM1A2PYH4 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
HFM1A2PYH4 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC24.57■■□□□ 1.52
HFM1A2PYH4 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC24.57■■□□□ 1.52
HFM1A2PYH4 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC24.57■■□□□ 1.52
HFM1A2PYH4 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC24.57■■□□□ 1.52
HFM1A2PYH4 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
HFM1A2PYH4 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
HFM1A2PYH4 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC24.56■■□□□ 1.52
HFM1A2PYH4 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
HFM1A2PYH4 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
HFM1A2PYH4 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
HFM1A2PYH4 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
HFM1A2PYH4 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC24.56■■□□□ 1.52
HFM1A2PYH4 KLF2P3-201ENST00000451977 1087 ntBASIC24.56■■□□□ 1.52
HFM1A2PYH4 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC24.56■■□□□ 1.52
HFM1A2PYH4 AC004449.1-201ENST00000564240 433 ntBASIC24.56■■□□□ 1.52
HFM1A2PYH4 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC24.56■■□□□ 1.52
HFM1A2PYH4 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
HFM1A2PYH4 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC24.56■■□□□ 1.52
HFM1A2PYH4 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
HFM1A2PYH4 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC24.56■■□□□ 1.52
HFM1A2PYH4 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
HFM1A2PYH4 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
HFM1A2PYH4 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
HFM1A2PYH4 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC24.56■■□□□ 1.52
HFM1A2PYH4 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
HFM1A2PYH4 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
HFM1A2PYH4 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
HFM1A2PYH4 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC24.56■■□□□ 1.52
HFM1A2PYH4 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
HFM1A2PYH4 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC24.55■■□□□ 1.52
HFM1A2PYH4 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC24.55■■□□□ 1.52
HFM1A2PYH4 RELA-227ENST00000615805 2236 ntTSL 5 BASIC24.55■■□□□ 1.52
HFM1A2PYH4 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC24.55■■□□□ 1.52
HFM1A2PYH4 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
HFM1A2PYH4 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
HFM1A2PYH4 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
HFM1A2PYH4 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
HFM1A2PYH4 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
HFM1A2PYH4 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
HFM1A2PYH4 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
HFM1A2PYH4 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
HFM1A2PYH4 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC24.55■■□□□ 1.52
HFM1A2PYH4 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
HFM1A2PYH4 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
HFM1A2PYH4 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
HFM1A2PYH4 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC24.55■■□□□ 1.52
HFM1A2PYH4 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
HFM1A2PYH4 OS9-205ENST00000413095 1660 ntTSL 2 BASIC24.55■■□□□ 1.52
HFM1A2PYH4 UBALD1-205ENST00000590891 2641 ntBASIC24.55■■□□□ 1.52
HFM1A2PYH4 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC24.55■■□□□ 1.52
HFM1A2PYH4 AL589702.1-201ENST00000641229 1509 ntBASIC24.54■■□□□ 1.52
HFM1A2PYH4 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
HFM1A2PYH4 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC24.54■■□□□ 1.52
HFM1A2PYH4 SYS1-203ENST00000414310 795 ntTSL 3 BASIC24.54■■□□□ 1.52
HFM1A2PYH4 SPDYE7P-202ENST00000420373 878 ntBASIC24.54■■□□□ 1.52
HFM1A2PYH4 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC24.54■■□□□ 1.52
HFM1A2PYH4 AC125807.1-201ENST00000483097 614 ntBASIC24.54■■□□□ 1.52
HFM1A2PYH4 AC098859.1-201ENST00000502915 1238 ntBASIC24.54■■□□□ 1.52
HFM1A2PYH4 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC24.54■■□□□ 1.52
HFM1A2PYH4 AC061975.2-201ENST00000581722 295 ntBASIC24.54■■□□□ 1.52
HFM1A2PYH4 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
HFM1A2PYH4 SPTSSB-204ENST00000617024 1292 ntBASIC24.54■■□□□ 1.52
HFM1A2PYH4 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC24.54■■□□□ 1.52
HFM1A2PYH4 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC24.54■■□□□ 1.52
HFM1A2PYH4 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
HFM1A2PYH4 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
HFM1A2PYH4 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
HFM1A2PYH4 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
HFM1A2PYH4 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
HFM1A2PYH4 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC24.54■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms