Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 RAD18-204ENST00000418463 563 ntTSL 4 BASIC27.5■■□□□ 1.99
BIVM-ERCC5R4GMW8 RAD18-205ENST00000421052 582 ntTSL 3 BASIC27.5■■□□□ 1.99
BIVM-ERCC5R4GMW8 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC27.5■■□□□ 1.99
BIVM-ERCC5R4GMW8 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC27.5■■□□□ 1.99
BIVM-ERCC5R4GMW8 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC27.5■■□□□ 1.99
BIVM-ERCC5R4GMW8 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC27.5■■□□□ 1.99
BIVM-ERCC5R4GMW8 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC27.5■■□□□ 1.99
BIVM-ERCC5R4GMW8 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
BIVM-ERCC5R4GMW8 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC27.5■■□□□ 1.99
BIVM-ERCC5R4GMW8 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC27.5■■□□□ 1.99
BIVM-ERCC5R4GMW8 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC27.5■■□□□ 1.99
BIVM-ERCC5R4GMW8 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
BIVM-ERCC5R4GMW8 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC27.5■■□□□ 1.99
BIVM-ERCC5R4GMW8 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
BIVM-ERCC5R4GMW8 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
BIVM-ERCC5R4GMW8 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC27.49■■□□□ 1.99
BIVM-ERCC5R4GMW8 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
BIVM-ERCC5R4GMW8 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
BIVM-ERCC5R4GMW8 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC27.49■■□□□ 1.99
BIVM-ERCC5R4GMW8 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
BIVM-ERCC5R4GMW8 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC27.49■■□□□ 1.99
BIVM-ERCC5R4GMW8 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC27.49■■□□□ 1.99
BIVM-ERCC5R4GMW8 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC27.49■■□□□ 1.99
BIVM-ERCC5R4GMW8 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
BIVM-ERCC5R4GMW8 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
BIVM-ERCC5R4GMW8 RRP7BP-205ENST00000566851 833 ntBASIC27.49■■□□□ 1.99
BIVM-ERCC5R4GMW8 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC27.49■■□□□ 1.99
BIVM-ERCC5R4GMW8 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC27.49■■□□□ 1.99
BIVM-ERCC5R4GMW8 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC27.49■■□□□ 1.99
BIVM-ERCC5R4GMW8 AL162274.1-201ENST00000617191 1098 ntBASIC27.49■■□□□ 1.99
BIVM-ERCC5R4GMW8 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC27.49■■□□□ 1.99
BIVM-ERCC5R4GMW8 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC27.49■■□□□ 1.99
BIVM-ERCC5R4GMW8 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC27.49■■□□□ 1.99
BIVM-ERCC5R4GMW8 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
BIVM-ERCC5R4GMW8 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC27.49■■□□□ 1.99
BIVM-ERCC5R4GMW8 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
BIVM-ERCC5R4GMW8 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC27.49■■□□□ 1.99
BIVM-ERCC5R4GMW8 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
BIVM-ERCC5R4GMW8 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC27.49■■□□□ 1.99
BIVM-ERCC5R4GMW8 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
BIVM-ERCC5R4GMW8 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC27.49■■□□□ 1.99
BIVM-ERCC5R4GMW8 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC27.49■■□□□ 1.99
BIVM-ERCC5R4GMW8 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC27.49■■□□□ 1.99
BIVM-ERCC5R4GMW8 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
BIVM-ERCC5R4GMW8 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC27.49■■□□□ 1.99
BIVM-ERCC5R4GMW8 AC026979.3-201ENST00000607315 403 ntBASIC27.49■■□□□ 1.99
BIVM-ERCC5R4GMW8 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
BIVM-ERCC5R4GMW8 RELA-227ENST00000615805 2236 ntTSL 5 BASIC27.48■■□□□ 1.99
BIVM-ERCC5R4GMW8 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
BIVM-ERCC5R4GMW8 AL645728.1-201ENST00000366221 2101 ntBASIC27.48■■□□□ 1.99
BIVM-ERCC5R4GMW8 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC27.48■■□□□ 1.99
BIVM-ERCC5R4GMW8 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.99
BIVM-ERCC5R4GMW8 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC27.48■■□□□ 1.99
BIVM-ERCC5R4GMW8 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC27.48■■□□□ 1.99
BIVM-ERCC5R4GMW8 CD276-203ENST00000537340 2439 ntTSL 2 BASIC27.48■■□□□ 1.99
BIVM-ERCC5R4GMW8 AMT-206ENST00000458307 1860 ntTSL 2 BASIC27.48■■□□□ 1.99
BIVM-ERCC5R4GMW8 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
BIVM-ERCC5R4GMW8 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC27.48■■□□□ 1.99
BIVM-ERCC5R4GMW8 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC27.48■■□□□ 1.99
BIVM-ERCC5R4GMW8 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
BIVM-ERCC5R4GMW8 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC27.48■■□□□ 1.99
BIVM-ERCC5R4GMW8 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
BIVM-ERCC5R4GMW8 OSM-203ENST00000403463 464 ntTSL 3 BASIC27.48■■□□□ 1.99
BIVM-ERCC5R4GMW8 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC27.48■■□□□ 1.99
BIVM-ERCC5R4GMW8 AC087499.6-201ENST00000411576 835 ntBASIC27.48■■□□□ 1.99
BIVM-ERCC5R4GMW8 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
BIVM-ERCC5R4GMW8 USP32P1-208ENST00000506594 1164 ntBASIC27.48■■□□□ 1.99
BIVM-ERCC5R4GMW8 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC27.48■■□□□ 1.99
BIVM-ERCC5R4GMW8 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC27.48■■□□□ 1.99
BIVM-ERCC5R4GMW8 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
BIVM-ERCC5R4GMW8 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC27.48■■□□□ 1.99
BIVM-ERCC5R4GMW8 AC008735.3-201ENST00000596646 500 ntBASIC27.48■■□□□ 1.99
BIVM-ERCC5R4GMW8 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC27.48■■□□□ 1.99
BIVM-ERCC5R4GMW8 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC27.48■■□□□ 1.99
BIVM-ERCC5R4GMW8 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC27.48■■□□□ 1.99
BIVM-ERCC5R4GMW8 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC27.48■■□□□ 1.99
BIVM-ERCC5R4GMW8 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
BIVM-ERCC5R4GMW8 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC27.47■■□□□ 1.99
BIVM-ERCC5R4GMW8 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
BIVM-ERCC5R4GMW8 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC27.47■■□□□ 1.99
BIVM-ERCC5R4GMW8 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
BIVM-ERCC5R4GMW8 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
BIVM-ERCC5R4GMW8 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC27.47■■□□□ 1.99
BIVM-ERCC5R4GMW8 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC27.47■■□□□ 1.99
BIVM-ERCC5R4GMW8 MXI1-205ENST00000393134 889 ntTSL 2 BASIC27.47■■□□□ 1.99
BIVM-ERCC5R4GMW8 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
BIVM-ERCC5R4GMW8 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC27.47■■□□□ 1.99
BIVM-ERCC5R4GMW8 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC27.47■■□□□ 1.99
BIVM-ERCC5R4GMW8 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC27.47■■□□□ 1.99
BIVM-ERCC5R4GMW8 CTBP2P3-201ENST00000585629 1255 ntBASIC27.47■■□□□ 1.99
BIVM-ERCC5R4GMW8 AC074044.1-201ENST00000609673 707 ntBASIC27.47■■□□□ 1.99
BIVM-ERCC5R4GMW8 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC27.47■■□□□ 1.99
BIVM-ERCC5R4GMW8 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC27.47■■□□□ 1.99
BIVM-ERCC5R4GMW8 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC27.47■■□□□ 1.99
BIVM-ERCC5R4GMW8 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
BIVM-ERCC5R4GMW8 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC27.47■■□□□ 1.99
BIVM-ERCC5R4GMW8 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
BIVM-ERCC5R4GMW8 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC27.46■■□□□ 1.99
BIVM-ERCC5R4GMW8 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
BIVM-ERCC5R4GMW8 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms