Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA6Q9Y5G7 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA6Q9Y5G7 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.24■□□□□ 0.19
PCDHGA6Q9Y5G7 CNN2P11-201ENST00000429351 262 ntBASIC16.24■□□□□ 0.19
PCDHGA6Q9Y5G7 METTL21AP1-201ENST00000438852 635 ntBASIC16.24■□□□□ 0.19
PCDHGA6Q9Y5G7 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA6Q9Y5G7 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHGA6Q9Y5G7 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHGA6Q9Y5G7 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.24■□□□□ 0.19
PCDHGA6Q9Y5G7 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PCDHGA6Q9Y5G7 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PCDHGA6Q9Y5G7 AL078644.1-201ENST00000609881 752 ntBASIC16.24■□□□□ 0.19
PCDHGA6Q9Y5G7 AC007064.4-201ENST00000637740 555 ntBASIC16.24■□□□□ 0.19
PCDHGA6Q9Y5G7 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PCDHGA6Q9Y5G7 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA6Q9Y5G7 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA6Q9Y5G7 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PCDHGA6Q9Y5G7 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.24■□□□□ 0.19
PCDHGA6Q9Y5G7 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA6Q9Y5G7 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
PCDHGA6Q9Y5G7 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA6Q9Y5G7 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
PCDHGA6Q9Y5G7 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PCDHGA6Q9Y5G7 BCAR1-209ENST00000546196 1340 ntBASIC16.23■□□□□ 0.19
PCDHGA6Q9Y5G7 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA6Q9Y5G7 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA6Q9Y5G7 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
PCDHGA6Q9Y5G7 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA6Q9Y5G7 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
PCDHGA6Q9Y5G7 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHGA6Q9Y5G7 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA6Q9Y5G7 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHGA6Q9Y5G7 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA6Q9Y5G7 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA6Q9Y5G7 CEND1P1-201ENST00000451006 455 ntBASIC16.23■□□□□ 0.19
PCDHGA6Q9Y5G7 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.23■□□□□ 0.19
PCDHGA6Q9Y5G7 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA6Q9Y5G7 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.23■□□□□ 0.19
PCDHGA6Q9Y5G7 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.23■□□□□ 0.19
PCDHGA6Q9Y5G7 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA6Q9Y5G7 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.23■□□□□ 0.19
PCDHGA6Q9Y5G7 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA6Q9Y5G7 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA6Q9Y5G7 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA6Q9Y5G7 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
PCDHGA6Q9Y5G7 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA6Q9Y5G7 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA6Q9Y5G7 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA6Q9Y5G7 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHGA6Q9Y5G7 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
PCDHGA6Q9Y5G7 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
PCDHGA6Q9Y5G7 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHGA6Q9Y5G7 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.22■□□□□ 0.19
PCDHGA6Q9Y5G7 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA6Q9Y5G7 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA6Q9Y5G7 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
PCDHGA6Q9Y5G7 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
PCDHGA6Q9Y5G7 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA6Q9Y5G7 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA6Q9Y5G7 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.22■□□□□ 0.19
PCDHGA6Q9Y5G7 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA6Q9Y5G7 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.22■□□□□ 0.19
PCDHGA6Q9Y5G7 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.22■□□□□ 0.19
PCDHGA6Q9Y5G7 AC074386.1-202ENST00000463561 864 ntBASIC16.22■□□□□ 0.19
PCDHGA6Q9Y5G7 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.22■□□□□ 0.19
PCDHGA6Q9Y5G7 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.22■□□□□ 0.19
PCDHGA6Q9Y5G7 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.22■□□□□ 0.19
PCDHGA6Q9Y5G7 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.22■□□□□ 0.19
PCDHGA6Q9Y5G7 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDHGA6Q9Y5G7 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.22■□□□□ 0.19
PCDHGA6Q9Y5G7 AC023141.13-201ENST00000604991 943 ntBASIC16.22■□□□□ 0.19
PCDHGA6Q9Y5G7 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.22■□□□□ 0.19
PCDHGA6Q9Y5G7 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA6Q9Y5G7 DOC2GP-204ENST00000639052 2548 ntBASIC16.22■□□□□ 0.19
PCDHGA6Q9Y5G7 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
PCDHGA6Q9Y5G7 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA6Q9Y5G7 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDHGA6Q9Y5G7 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA6Q9Y5G7 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA6Q9Y5G7 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA6Q9Y5G7 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PCDHGA6Q9Y5G7 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA6Q9Y5G7 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA6Q9Y5G7 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA6Q9Y5G7 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.22■□□□□ 0.19
PCDHGA6Q9Y5G7 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA6Q9Y5G7 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA6Q9Y5G7 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.22■□□□□ 0.19
PCDHGA6Q9Y5G7 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGA6Q9Y5G7 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGA6Q9Y5G7 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGA6Q9Y5G7 AL590787.1-201ENST00000568856 1315 ntBASIC16.21■□□□□ 0.19
PCDHGA6Q9Y5G7 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGA6Q9Y5G7 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGA6Q9Y5G7 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGA6Q9Y5G7 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.21■□□□□ 0.19
PCDHGA6Q9Y5G7 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGA6Q9Y5G7 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGA6Q9Y5G7 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGA6Q9Y5G7 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms