Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 FOXO1B-201ENST00000504678 1527 ntBASIC17.46■□□□□ 0.39
YIPF1Q9Y548 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
YIPF1Q9Y548 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
YIPF1Q9Y548 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
YIPF1Q9Y548 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
YIPF1Q9Y548 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
YIPF1Q9Y548 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.45■□□□□ 0.38
YIPF1Q9Y548 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
YIPF1Q9Y548 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
YIPF1Q9Y548 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
YIPF1Q9Y548 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
YIPF1Q9Y548 AP3S2-216ENST00000617003 1561 ntBASIC17.45■□□□□ 0.38
YIPF1Q9Y548 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
YIPF1Q9Y548 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
YIPF1Q9Y548 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
YIPF1Q9Y548 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
YIPF1Q9Y548 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
YIPF1Q9Y548 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.45■□□□□ 0.38
YIPF1Q9Y548 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.45■□□□□ 0.38
YIPF1Q9Y548 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.45■□□□□ 0.38
YIPF1Q9Y548 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.45■□□□□ 0.38
YIPF1Q9Y548 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
YIPF1Q9Y548 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.45■□□□□ 0.38
YIPF1Q9Y548 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.45■□□□□ 0.38
YIPF1Q9Y548 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
YIPF1Q9Y548 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.45■□□□□ 0.38
YIPF1Q9Y548 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
YIPF1Q9Y548 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.45■□□□□ 0.38
YIPF1Q9Y548 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.45■□□□□ 0.38
YIPF1Q9Y548 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
YIPF1Q9Y548 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
YIPF1Q9Y548 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
YIPF1Q9Y548 RNF165-205ENST00000588679 2904 ntBASIC17.45■□□□□ 0.38
YIPF1Q9Y548 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
YIPF1Q9Y548 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
YIPF1Q9Y548 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
YIPF1Q9Y548 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
YIPF1Q9Y548 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
YIPF1Q9Y548 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.45■□□□□ 0.38
YIPF1Q9Y548 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
YIPF1Q9Y548 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
YIPF1Q9Y548 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
YIPF1Q9Y548 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
YIPF1Q9Y548 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.44■□□□□ 0.38
YIPF1Q9Y548 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
YIPF1Q9Y548 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.44■□□□□ 0.38
YIPF1Q9Y548 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.44■□□□□ 0.38
YIPF1Q9Y548 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.44■□□□□ 0.38
YIPF1Q9Y548 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
YIPF1Q9Y548 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.44■□□□□ 0.38
YIPF1Q9Y548 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
YIPF1Q9Y548 AC018529.1-201ENST00000613063 361 ntBASIC17.44■□□□□ 0.38
YIPF1Q9Y548 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.44■□□□□ 0.38
YIPF1Q9Y548 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.44■□□□□ 0.38
YIPF1Q9Y548 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
YIPF1Q9Y548 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.44■□□□□ 0.38
YIPF1Q9Y548 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
YIPF1Q9Y548 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
YIPF1Q9Y548 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
YIPF1Q9Y548 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
YIPF1Q9Y548 KRT8P39-201ENST00000396270 1433 ntBASIC17.44■□□□□ 0.38
YIPF1Q9Y548 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
YIPF1Q9Y548 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
YIPF1Q9Y548 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.44■□□□□ 0.38
YIPF1Q9Y548 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
YIPF1Q9Y548 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
YIPF1Q9Y548 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
YIPF1Q9Y548 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
YIPF1Q9Y548 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
YIPF1Q9Y548 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.44■□□□□ 0.38
YIPF1Q9Y548 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.44■□□□□ 0.38
YIPF1Q9Y548 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
YIPF1Q9Y548 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
YIPF1Q9Y548 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
YIPF1Q9Y548 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
YIPF1Q9Y548 AC073439.1-201ENST00000624121 1774 ntBASIC17.43■□□□□ 0.38
YIPF1Q9Y548 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
YIPF1Q9Y548 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
YIPF1Q9Y548 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.43■□□□□ 0.38
YIPF1Q9Y548 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.43■□□□□ 0.38
YIPF1Q9Y548 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.43■□□□□ 0.38
YIPF1Q9Y548 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.43■□□□□ 0.38
YIPF1Q9Y548 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
YIPF1Q9Y548 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
YIPF1Q9Y548 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
YIPF1Q9Y548 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.43■□□□□ 0.38
YIPF1Q9Y548 AC092580.3-201ENST00000430932 139 ntBASIC17.43■□□□□ 0.38
YIPF1Q9Y548 AC097493.3-201ENST00000509725 367 ntBASIC17.43■□□□□ 0.38
YIPF1Q9Y548 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.43■□□□□ 0.38
YIPF1Q9Y548 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.43■□□□□ 0.38
YIPF1Q9Y548 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.43■□□□□ 0.38
YIPF1Q9Y548 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.43■□□□□ 0.38
YIPF1Q9Y548 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
YIPF1Q9Y548 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.43■□□□□ 0.38
YIPF1Q9Y548 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
YIPF1Q9Y548 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
YIPF1Q9Y548 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
YIPF1Q9Y548 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.43■□□□□ 0.38
YIPF1Q9Y548 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
YIPF1Q9Y548 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms