Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RCL1Q9Y2P8 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC13.81□□□□□ -0.2
RCL1Q9Y2P8 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RCL1Q9Y2P8 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
RCL1Q9Y2P8 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RCL1Q9Y2P8 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
RCL1Q9Y2P8 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC13.81□□□□□ -0.2
RCL1Q9Y2P8 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RCL1Q9Y2P8 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RCL1Q9Y2P8 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC13.81□□□□□ -0.2
RCL1Q9Y2P8 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RCL1Q9Y2P8 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RCL1Q9Y2P8 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
RCL1Q9Y2P8 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
RCL1Q9Y2P8 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
RCL1Q9Y2P8 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
RCL1Q9Y2P8 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC13.81□□□□□ -0.2
RCL1Q9Y2P8 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RCL1Q9Y2P8 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RCL1Q9Y2P8 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RCL1Q9Y2P8 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
RCL1Q9Y2P8 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC13.81□□□□□ -0.2
RCL1Q9Y2P8 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RCL1Q9Y2P8 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RCL1Q9Y2P8 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
RCL1Q9Y2P8 MIR600HG-201ENST00000449175 5984 ntBASIC13.8□□□□□ -0.2
RCL1Q9Y2P8 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
RCL1Q9Y2P8 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC13.8□□□□□ -0.2
RCL1Q9Y2P8 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RCL1Q9Y2P8 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
RCL1Q9Y2P8 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RCL1Q9Y2P8 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
RCL1Q9Y2P8 AL596087.1-201ENST00000400979 1969 ntBASIC13.8□□□□□ -0.2
RCL1Q9Y2P8 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
RCL1Q9Y2P8 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.8□□□□□ -0.2
RCL1Q9Y2P8 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
RCL1Q9Y2P8 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC13.8□□□□□ -0.2
RCL1Q9Y2P8 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RCL1Q9Y2P8 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
RCL1Q9Y2P8 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC13.8□□□□□ -0.2
RCL1Q9Y2P8 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RCL1Q9Y2P8 PRORSD1P-201ENST00000295112 541 ntBASIC13.8□□□□□ -0.2
RCL1Q9Y2P8 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
RCL1Q9Y2P8 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RCL1Q9Y2P8 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RCL1Q9Y2P8 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RCL1Q9Y2P8 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC13.8□□□□□ -0.2
RCL1Q9Y2P8 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
RCL1Q9Y2P8 AC007967.3-201ENST00000434308 558 ntBASIC13.8□□□□□ -0.2
RCL1Q9Y2P8 HLA-F-220ENST00000434407 884 ntBASIC13.8□□□□□ -0.2
RCL1Q9Y2P8 AC098590.1-201ENST00000468126 897 ntBASIC13.8□□□□□ -0.2
RCL1Q9Y2P8 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RCL1Q9Y2P8 HLA-J-202ENST00000469281 1241 ntBASIC13.8□□□□□ -0.2
RCL1Q9Y2P8 DHDH-203ENST00000522614 776 ntTSL 5 BASIC13.8□□□□□ -0.2
RCL1Q9Y2P8 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC13.8□□□□□ -0.2
RCL1Q9Y2P8 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC13.8□□□□□ -0.2
RCL1Q9Y2P8 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC13.8□□□□□ -0.2
RCL1Q9Y2P8 MIR4785-201ENST00000585005 73 ntBASIC13.8□□□□□ -0.2
RCL1Q9Y2P8 GPX4-207ENST00000589115 812 ntTSL 2 BASIC13.8□□□□□ -0.2
RCL1Q9Y2P8 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC13.8□□□□□ -0.2
RCL1Q9Y2P8 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
RCL1Q9Y2P8 Z99916.2-201ENST00000604037 246 ntBASIC13.8□□□□□ -0.2
RCL1Q9Y2P8 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
RCL1Q9Y2P8 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC13.8□□□□□ -0.2
RCL1Q9Y2P8 GLDC-219ENST00000640208 420 ntTSL 2 BASIC13.8□□□□□ -0.2
RCL1Q9Y2P8 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RCL1Q9Y2P8 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC13.8□□□□□ -0.2
RCL1Q9Y2P8 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RCL1Q9Y2P8 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RCL1Q9Y2P8 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC13.8□□□□□ -0.2
RCL1Q9Y2P8 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RCL1Q9Y2P8 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RCL1Q9Y2P8 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RCL1Q9Y2P8 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC13.8□□□□□ -0.2
RCL1Q9Y2P8 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RCL1Q9Y2P8 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RCL1Q9Y2P8 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RCL1Q9Y2P8 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
RCL1Q9Y2P8 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RCL1Q9Y2P8 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
RCL1Q9Y2P8 CYP2D8P-201ENST00000433633 1490 ntBASIC13.8□□□□□ -0.2
RCL1Q9Y2P8 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RCL1Q9Y2P8 HLA-DQB2-231ENST00000435145 2026 ntBASIC13.8□□□□□ -0.2
RCL1Q9Y2P8 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
RCL1Q9Y2P8 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.8□□□□□ -0.2
RCL1Q9Y2P8 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RCL1Q9Y2P8 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RCL1Q9Y2P8 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RCL1Q9Y2P8 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RCL1Q9Y2P8 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RCL1Q9Y2P8 AL049757.1-201ENST00000616842 1596 ntBASIC13.79□□□□□ -0.2
RCL1Q9Y2P8 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RCL1Q9Y2P8 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RCL1Q9Y2P8 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RCL1Q9Y2P8 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RCL1Q9Y2P8 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RCL1Q9Y2P8 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RCL1Q9Y2P8 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RCL1Q9Y2P8 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RCL1Q9Y2P8 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms