Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPIPA1Q9UND3 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPIPA1Q9UND3 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NPIPA1Q9UND3 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.53■□□□□ 0.08
NPIPA1Q9UND3 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.53■□□□□ 0.08
NPIPA1Q9UND3 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.53■□□□□ 0.08
NPIPA1Q9UND3 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPIPA1Q9UND3 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.53■□□□□ 0.08
NPIPA1Q9UND3 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.53■□□□□ 0.08
NPIPA1Q9UND3 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
NPIPA1Q9UND3 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
NPIPA1Q9UND3 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.53■□□□□ 0.08
NPIPA1Q9UND3 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
NPIPA1Q9UND3 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
NPIPA1Q9UND3 AC091812.2-201ENST00000619081 385 ntBASIC15.53■□□□□ 0.08
NPIPA1Q9UND3 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPIPA1Q9UND3 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPIPA1Q9UND3 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPIPA1Q9UND3 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NPIPA1Q9UND3 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPIPA1Q9UND3 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPIPA1Q9UND3 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NPIPA1Q9UND3 PKD1P5-201ENST00000532415 10291 ntBASIC15.53■□□□□ 0.08
NPIPA1Q9UND3 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPIPA1Q9UND3 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
NPIPA1Q9UND3 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPIPA1Q9UND3 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NPIPA1Q9UND3 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPIPA1Q9UND3 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
NPIPA1Q9UND3 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPIPA1Q9UND3 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPIPA1Q9UND3 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.53■□□□□ 0.08
NPIPA1Q9UND3 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPIPA1Q9UND3 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPIPA1Q9UND3 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NPIPA1Q9UND3 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
NPIPA1Q9UND3 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NPIPA1Q9UND3 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NPIPA1Q9UND3 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
NPIPA1Q9UND3 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
NPIPA1Q9UND3 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.52■□□□□ 0.08
NPIPA1Q9UND3 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NPIPA1Q9UND3 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
NPIPA1Q9UND3 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NPIPA1Q9UND3 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
NPIPA1Q9UND3 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NPIPA1Q9UND3 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NPIPA1Q9UND3 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.52■□□□□ 0.08
NPIPA1Q9UND3 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.52■□□□□ 0.08
NPIPA1Q9UND3 FAM185BP-201ENST00000443595 716 ntBASIC15.52■□□□□ 0.08
NPIPA1Q9UND3 ACTG1P14-201ENST00000446382 1122 ntBASIC15.52■□□□□ 0.08
NPIPA1Q9UND3 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.52■□□□□ 0.08
NPIPA1Q9UND3 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NPIPA1Q9UND3 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.52■□□□□ 0.08
NPIPA1Q9UND3 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.52■□□□□ 0.08
NPIPA1Q9UND3 AP002472.1-201ENST00000577490 586 ntBASIC15.52■□□□□ 0.08
NPIPA1Q9UND3 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.52■□□□□ 0.08
NPIPA1Q9UND3 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NPIPA1Q9UND3 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.52■□□□□ 0.08
NPIPA1Q9UND3 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.52■□□□□ 0.08
NPIPA1Q9UND3 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.52■□□□□ 0.08
NPIPA1Q9UND3 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
NPIPA1Q9UND3 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.07
NPIPA1Q9UND3 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
NPIPA1Q9UND3 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
NPIPA1Q9UND3 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NPIPA1Q9UND3 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
NPIPA1Q9UND3 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
NPIPA1Q9UND3 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NPIPA1Q9UND3 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.52■□□□□ 0.07
NPIPA1Q9UND3 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
NPIPA1Q9UND3 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NPIPA1Q9UND3 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.51■□□□□ 0.07
NPIPA1Q9UND3 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPIPA1Q9UND3 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
NPIPA1Q9UND3 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
NPIPA1Q9UND3 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPIPA1Q9UND3 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
NPIPA1Q9UND3 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.51■□□□□ 0.07
NPIPA1Q9UND3 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPIPA1Q9UND3 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPIPA1Q9UND3 AL121761.2-201ENST00000598007 1648 ntBASIC15.51■□□□□ 0.07
NPIPA1Q9UND3 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPIPA1Q9UND3 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPIPA1Q9UND3 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPIPA1Q9UND3 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
NPIPA1Q9UND3 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.51■□□□□ 0.07
NPIPA1Q9UND3 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPIPA1Q9UND3 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPIPA1Q9UND3 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
NPIPA1Q9UND3 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.51■□□□□ 0.07
NPIPA1Q9UND3 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.51■□□□□ 0.07
NPIPA1Q9UND3 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
NPIPA1Q9UND3 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NPIPA1Q9UND3 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.51■□□□□ 0.07
NPIPA1Q9UND3 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NPIPA1Q9UND3 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.51■□□□□ 0.07
NPIPA1Q9UND3 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.51■□□□□ 0.07
NPIPA1Q9UND3 AC068137.2-201ENST00000605408 478 ntBASIC15.51■□□□□ 0.07
NPIPA1Q9UND3 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms