Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH9Q9ULB4 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDH9Q9ULB4 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDH9Q9ULB4 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CDH9Q9ULB4 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.71■□□□□ 0.43
CDH9Q9ULB4 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDH9Q9ULB4 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CDH9Q9ULB4 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.71■□□□□ 0.43
CDH9Q9ULB4 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH9Q9ULB4 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH9Q9ULB4 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CDH9Q9ULB4 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDH9Q9ULB4 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
CDH9Q9ULB4 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH9Q9ULB4 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.71■□□□□ 0.43
CDH9Q9ULB4 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
CDH9Q9ULB4 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDH9Q9ULB4 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDH9Q9ULB4 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.71■□□□□ 0.43
CDH9Q9ULB4 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDH9Q9ULB4 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.71■□□□□ 0.43
CDH9Q9ULB4 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.71■□□□□ 0.43
CDH9Q9ULB4 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CDH9Q9ULB4 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH9Q9ULB4 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CDH9Q9ULB4 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDH9Q9ULB4 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
CDH9Q9ULB4 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
CDH9Q9ULB4 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH9Q9ULB4 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
CDH9Q9ULB4 AC016027.1-202ENST00000607927 1699 ntBASIC17.71■□□□□ 0.42
CDH9Q9ULB4 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.71■□□□□ 0.42
CDH9Q9ULB4 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH9Q9ULB4 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDH9Q9ULB4 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH9Q9ULB4 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.7■□□□□ 0.42
CDH9Q9ULB4 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH9Q9ULB4 AC105020.1-201ENST00000435356 2205 ntBASIC17.7■□□□□ 0.42
CDH9Q9ULB4 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH9Q9ULB4 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDH9Q9ULB4 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDH9Q9ULB4 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH9Q9ULB4 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH9Q9ULB4 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDH9Q9ULB4 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.7■□□□□ 0.42
CDH9Q9ULB4 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDH9Q9ULB4 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.7■□□□□ 0.42
CDH9Q9ULB4 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH9Q9ULB4 AC005915.1-201ENST00000624912 2018 ntBASIC17.7■□□□□ 0.42
CDH9Q9ULB4 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.7■□□□□ 0.42
CDH9Q9ULB4 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.7■□□□□ 0.42
CDH9Q9ULB4 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CDH9Q9ULB4 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.7■□□□□ 0.42
CDH9Q9ULB4 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDH9Q9ULB4 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.7■□□□□ 0.42
CDH9Q9ULB4 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.7■□□□□ 0.42
CDH9Q9ULB4 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH9Q9ULB4 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH9Q9ULB4 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CDH9Q9ULB4 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
CDH9Q9ULB4 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.69■□□□□ 0.42
CDH9Q9ULB4 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH9Q9ULB4 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDH9Q9ULB4 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CDH9Q9ULB4 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.69■□□□□ 0.42
CDH9Q9ULB4 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH9Q9ULB4 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.69■□□□□ 0.42
CDH9Q9ULB4 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH9Q9ULB4 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.69■□□□□ 0.42
CDH9Q9ULB4 AL592309.1-201ENST00000443127 649 ntBASIC17.69■□□□□ 0.42
CDH9Q9ULB4 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.69■□□□□ 0.42
CDH9Q9ULB4 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.69■□□□□ 0.42
CDH9Q9ULB4 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.69■□□□□ 0.42
CDH9Q9ULB4 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.69■□□□□ 0.42
CDH9Q9ULB4 AC027612.4-201ENST00000605371 583 ntBASIC17.69■□□□□ 0.42
CDH9Q9ULB4 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH9Q9ULB4 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CDH9Q9ULB4 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH9Q9ULB4 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH9Q9ULB4 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH9Q9ULB4 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH9Q9ULB4 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.69■□□□□ 0.42
CDH9Q9ULB4 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH9Q9ULB4 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDH9Q9ULB4 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH9Q9ULB4 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CDH9Q9ULB4 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDH9Q9ULB4 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDH9Q9ULB4 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDH9Q9ULB4 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH9Q9ULB4 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.68■□□□□ 0.42
CDH9Q9ULB4 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH9Q9ULB4 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH9Q9ULB4 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH9Q9ULB4 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.68■□□□□ 0.42
CDH9Q9ULB4 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CDH9Q9ULB4 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH9Q9ULB4 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CDH9Q9ULB4 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CDH9Q9ULB4 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms