Protein–RNA interactions for Protein: Q9UHL9

GTF2IRD1, General transcription factor II-I repeat domain-containing protein 1, humanhuman

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD1Q9UHL9 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.35■□□□□ 0.53
GTF2IRD1Q9UHL9 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
GTF2IRD1Q9UHL9 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.35■□□□□ 0.53
GTF2IRD1Q9UHL9 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GTF2IRD1Q9UHL9 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.35■□□□□ 0.53
GTF2IRD1Q9UHL9 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
GTF2IRD1Q9UHL9 AC006277.1-201ENST00000624348 1610 ntBASIC18.35■□□□□ 0.53
GTF2IRD1Q9UHL9 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC18.35■□□□□ 0.53
GTF2IRD1Q9UHL9 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GTF2IRD1Q9UHL9 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GTF2IRD1Q9UHL9 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GTF2IRD1Q9UHL9 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC18.35■□□□□ 0.53
GTF2IRD1Q9UHL9 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
GTF2IRD1Q9UHL9 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.35■□□□□ 0.53
GTF2IRD1Q9UHL9 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GTF2IRD1Q9UHL9 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.35■□□□□ 0.53
GTF2IRD1Q9UHL9 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC18.35■□□□□ 0.53
GTF2IRD1Q9UHL9 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC18.35■□□□□ 0.53
GTF2IRD1Q9UHL9 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC18.35■□□□□ 0.53
GTF2IRD1Q9UHL9 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC18.35■□□□□ 0.53
GTF2IRD1Q9UHL9 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC18.35■□□□□ 0.53
GTF2IRD1Q9UHL9 SPTSSB-204ENST00000617024 1292 ntBASIC18.35■□□□□ 0.53
GTF2IRD1Q9UHL9 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.35■□□□□ 0.53
GTF2IRD1Q9UHL9 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
GTF2IRD1Q9UHL9 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GTF2IRD1Q9UHL9 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GTF2IRD1Q9UHL9 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.35■□□□□ 0.53
GTF2IRD1Q9UHL9 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
GTF2IRD1Q9UHL9 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GTF2IRD1Q9UHL9 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GTF2IRD1Q9UHL9 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
GTF2IRD1Q9UHL9 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
GTF2IRD1Q9UHL9 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GTF2IRD1Q9UHL9 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GTF2IRD1Q9UHL9 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
GTF2IRD1Q9UHL9 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GTF2IRD1Q9UHL9 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GTF2IRD1Q9UHL9 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GTF2IRD1Q9UHL9 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
GTF2IRD1Q9UHL9 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
GTF2IRD1Q9UHL9 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.34■□□□□ 0.53
GTF2IRD1Q9UHL9 AL671710.1-201ENST00000610245 2349 ntBASIC18.34■□□□□ 0.53
GTF2IRD1Q9UHL9 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GTF2IRD1Q9UHL9 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.34■□□□□ 0.53
GTF2IRD1Q9UHL9 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.34■□□□□ 0.53
GTF2IRD1Q9UHL9 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
GTF2IRD1Q9UHL9 CROCCP2-202ENST00000412962 2773 ntBASIC18.34■□□□□ 0.53
GTF2IRD1Q9UHL9 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.34■□□□□ 0.53
GTF2IRD1Q9UHL9 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GTF2IRD1Q9UHL9 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.34■□□□□ 0.53
GTF2IRD1Q9UHL9 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GTF2IRD1Q9UHL9 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GTF2IRD1Q9UHL9 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GTF2IRD1Q9UHL9 GRAP-202ENST00000395635 834 ntTSL 2 BASIC18.34■□□□□ 0.53
GTF2IRD1Q9UHL9 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC18.34■□□□□ 0.53
GTF2IRD1Q9UHL9 AL353705.2-201ENST00000428243 662 ntBASIC18.34■□□□□ 0.53
GTF2IRD1Q9UHL9 COQ9-214ENST00000567933 882 ntTSL 3 BASIC18.34■□□□□ 0.53
GTF2IRD1Q9UHL9 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.34■□□□□ 0.53
GTF2IRD1Q9UHL9 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GTF2IRD1Q9UHL9 AL662799.1-202ENST00000614205 422 ntBASIC18.34■□□□□ 0.53
GTF2IRD1Q9UHL9 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
GTF2IRD1Q9UHL9 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GTF2IRD1Q9UHL9 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
GTF2IRD1Q9UHL9 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GTF2IRD1Q9UHL9 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
GTF2IRD1Q9UHL9 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GTF2IRD1Q9UHL9 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
GTF2IRD1Q9UHL9 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
GTF2IRD1Q9UHL9 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GTF2IRD1Q9UHL9 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
GTF2IRD1Q9UHL9 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.33■□□□□ 0.53
GTF2IRD1Q9UHL9 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
GTF2IRD1Q9UHL9 BCL2-203ENST00000589955 5011 ntBASIC18.33■□□□□ 0.53
GTF2IRD1Q9UHL9 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.33■□□□□ 0.53
GTF2IRD1Q9UHL9 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
GTF2IRD1Q9UHL9 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GTF2IRD1Q9UHL9 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
GTF2IRD1Q9UHL9 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GTF2IRD1Q9UHL9 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC18.33■□□□□ 0.52
GTF2IRD1Q9UHL9 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
GTF2IRD1Q9UHL9 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
GTF2IRD1Q9UHL9 AC009477.1-201ENST00000452936 217 ntBASIC18.33■□□□□ 0.52
GTF2IRD1Q9UHL9 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
GTF2IRD1Q9UHL9 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
GTF2IRD1Q9UHL9 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
GTF2IRD1Q9UHL9 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
GTF2IRD1Q9UHL9 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC18.33■□□□□ 0.52
GTF2IRD1Q9UHL9 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC18.33■□□□□ 0.52
GTF2IRD1Q9UHL9 QPRT-203ENST00000562473 579 ntTSL 3 BASIC18.33■□□□□ 0.52
GTF2IRD1Q9UHL9 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC18.33■□□□□ 0.52
GTF2IRD1Q9UHL9 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC18.33■□□□□ 0.52
GTF2IRD1Q9UHL9 AC027307.3-201ENST00000594262 1100 ntBASIC18.33■□□□□ 0.52
GTF2IRD1Q9UHL9 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC18.33■□□□□ 0.52
GTF2IRD1Q9UHL9 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.33■□□□□ 0.52
GTF2IRD1Q9UHL9 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
GTF2IRD1Q9UHL9 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
GTF2IRD1Q9UHL9 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GTF2IRD1Q9UHL9 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
GTF2IRD1Q9UHL9 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
GTF2IRD1Q9UHL9 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms