Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CPNE7Q9UBL6 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.28■□□□□ 0.2
CPNE7Q9UBL6 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE7Q9UBL6 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE7Q9UBL6 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE7Q9UBL6 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE7Q9UBL6 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.28■□□□□ 0.2
CPNE7Q9UBL6 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CPNE7Q9UBL6 WASH6P-202ENST00000359512 1437 ntBASIC16.28■□□□□ 0.2
CPNE7Q9UBL6 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CPNE7Q9UBL6 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE7Q9UBL6 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE7Q9UBL6 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE7Q9UBL6 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE7Q9UBL6 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE7Q9UBL6 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
CPNE7Q9UBL6 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.27■□□□□ 0.2
CPNE7Q9UBL6 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CPNE7Q9UBL6 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE7Q9UBL6 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE7Q9UBL6 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE7Q9UBL6 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE7Q9UBL6 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CPNE7Q9UBL6 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.27■□□□□ 0.2
CPNE7Q9UBL6 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE7Q9UBL6 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.27■□□□□ 0.2
CPNE7Q9UBL6 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CPNE7Q9UBL6 AL592309.1-201ENST00000443127 649 ntBASIC16.27■□□□□ 0.2
CPNE7Q9UBL6 AC023141.5-201ENST00000458585 616 ntBASIC16.27■□□□□ 0.2
CPNE7Q9UBL6 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.27■□□□□ 0.2
CPNE7Q9UBL6 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.27■□□□□ 0.2
CPNE7Q9UBL6 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE7Q9UBL6 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE7Q9UBL6 AC027796.2-201ENST00000575326 344 ntBASIC16.27■□□□□ 0.2
CPNE7Q9UBL6 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.27■□□□□ 0.2
CPNE7Q9UBL6 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.27■□□□□ 0.2
CPNE7Q9UBL6 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
CPNE7Q9UBL6 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.27■□□□□ 0.2
CPNE7Q9UBL6 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE7Q9UBL6 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE7Q9UBL6 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CPNE7Q9UBL6 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
CPNE7Q9UBL6 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.19
CPNE7Q9UBL6 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.19
CPNE7Q9UBL6 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.27■□□□□ 0.19
CPNE7Q9UBL6 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CPNE7Q9UBL6 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.19
CPNE7Q9UBL6 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
CPNE7Q9UBL6 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE7Q9UBL6 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.26■□□□□ 0.19
CPNE7Q9UBL6 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE7Q9UBL6 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CPNE7Q9UBL6 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE7Q9UBL6 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE7Q9UBL6 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE7Q9UBL6 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE7Q9UBL6 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE7Q9UBL6 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE7Q9UBL6 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE7Q9UBL6 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.26■□□□□ 0.19
CPNE7Q9UBL6 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.26■□□□□ 0.19
CPNE7Q9UBL6 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE7Q9UBL6 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE7Q9UBL6 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE7Q9UBL6 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CPNE7Q9UBL6 AL627223.1-201ENST00000416693 442 ntBASIC16.26■□□□□ 0.19
CPNE7Q9UBL6 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.26■□□□□ 0.19
CPNE7Q9UBL6 AC005237.2-201ENST00000434368 219 ntBASIC16.26■□□□□ 0.19
CPNE7Q9UBL6 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.26■□□□□ 0.19
CPNE7Q9UBL6 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.26■□□□□ 0.19
CPNE7Q9UBL6 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.26■□□□□ 0.19
CPNE7Q9UBL6 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.26■□□□□ 0.19
CPNE7Q9UBL6 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.26■□□□□ 0.19
CPNE7Q9UBL6 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.26■□□□□ 0.19
CPNE7Q9UBL6 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE7Q9UBL6 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE7Q9UBL6 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.26■□□□□ 0.19
CPNE7Q9UBL6 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CPNE7Q9UBL6 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.26■□□□□ 0.19
CPNE7Q9UBL6 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE7Q9UBL6 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE7Q9UBL6 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE7Q9UBL6 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.26■□□□□ 0.19
CPNE7Q9UBL6 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.26■□□□□ 0.19
CPNE7Q9UBL6 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE7Q9UBL6 AC006277.1-201ENST00000624348 1610 ntBASIC16.26■□□□□ 0.19
CPNE7Q9UBL6 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.26■□□□□ 0.19
CPNE7Q9UBL6 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE7Q9UBL6 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE7Q9UBL6 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CPNE7Q9UBL6 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CPNE7Q9UBL6 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
CPNE7Q9UBL6 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CPNE7Q9UBL6 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CPNE7Q9UBL6 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.25■□□□□ 0.19
CPNE7Q9UBL6 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CPNE7Q9UBL6 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CPNE7Q9UBL6 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CPNE7Q9UBL6 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CPNE7Q9UBL6 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms