Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 AC011676.5-201ENST00000624864 2660 ntBASIC20.41■□□□□ 0.86
HMG20BQ9P0W2 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
HMG20BQ9P0W2 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC20.41■□□□□ 0.86
HMG20BQ9P0W2 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
HMG20BQ9P0W2 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HMG20BQ9P0W2 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HMG20BQ9P0W2 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
HMG20BQ9P0W2 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC20.41■□□□□ 0.86
HMG20BQ9P0W2 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HMG20BQ9P0W2 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HMG20BQ9P0W2 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC20.41■□□□□ 0.86
HMG20BQ9P0W2 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HMG20BQ9P0W2 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC20.41■□□□□ 0.86
HMG20BQ9P0W2 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HMG20BQ9P0W2 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HMG20BQ9P0W2 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HMG20BQ9P0W2 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HMG20BQ9P0W2 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HMG20BQ9P0W2 TUBB8P12-201ENST00000308911 1335 ntBASIC20.4■□□□□ 0.86
HMG20BQ9P0W2 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
HMG20BQ9P0W2 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC20.4■□□□□ 0.86
HMG20BQ9P0W2 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC20.4■□□□□ 0.86
HMG20BQ9P0W2 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
HMG20BQ9P0W2 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HMG20BQ9P0W2 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC20.4■□□□□ 0.86
HMG20BQ9P0W2 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC20.4■□□□□ 0.86
HMG20BQ9P0W2 TUBB7P-202ENST00000428444 1305 ntBASIC20.4■□□□□ 0.86
HMG20BQ9P0W2 METTL21AP1-201ENST00000438852 635 ntBASIC20.4■□□□□ 0.86
HMG20BQ9P0W2 TIMM8BP1-201ENST00000452384 211 ntBASIC20.4■□□□□ 0.86
HMG20BQ9P0W2 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HMG20BQ9P0W2 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
HMG20BQ9P0W2 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HMG20BQ9P0W2 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC20.4■□□□□ 0.86
HMG20BQ9P0W2 PCDHB17P-201ENST00000539533 2393 ntBASIC20.4■□□□□ 0.86
HMG20BQ9P0W2 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC20.4■□□□□ 0.86
HMG20BQ9P0W2 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC20.4■□□□□ 0.86
HMG20BQ9P0W2 AC243562.1-201ENST00000560672 389 ntBASIC20.4■□□□□ 0.86
HMG20BQ9P0W2 AC093520.2-201ENST00000561830 333 ntBASIC20.4■□□□□ 0.86
HMG20BQ9P0W2 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC20.4■□□□□ 0.86
HMG20BQ9P0W2 TUBB8P7-204ENST00000567960 1332 ntBASIC20.4■□□□□ 0.86
HMG20BQ9P0W2 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC20.4■□□□□ 0.86
HMG20BQ9P0W2 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC20.4■□□□□ 0.86
HMG20BQ9P0W2 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HMG20BQ9P0W2 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC20.39■□□□□ 0.86
HMG20BQ9P0W2 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
HMG20BQ9P0W2 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC20.39■□□□□ 0.86
HMG20BQ9P0W2 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
HMG20BQ9P0W2 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC20.39■□□□□ 0.86
HMG20BQ9P0W2 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
HMG20BQ9P0W2 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC20.39■□□□□ 0.85
HMG20BQ9P0W2 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
HMG20BQ9P0W2 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HMG20BQ9P0W2 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC20.39■□□□□ 0.85
HMG20BQ9P0W2 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
HMG20BQ9P0W2 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HMG20BQ9P0W2 AL139400.1-201ENST00000366220 510 ntBASIC20.39■□□□□ 0.85
HMG20BQ9P0W2 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
HMG20BQ9P0W2 TFAMP1-201ENST00000412727 736 ntBASIC20.39■□□□□ 0.85
HMG20BQ9P0W2 RARRES2P8-201ENST00000566335 367 ntBASIC20.39■□□□□ 0.85
HMG20BQ9P0W2 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
HMG20BQ9P0W2 AC004835.2-201ENST00000603762 682 ntBASIC20.39■□□□□ 0.85
HMG20BQ9P0W2 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC20.39■□□□□ 0.85
HMG20BQ9P0W2 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC20.39■□□□□ 0.85
HMG20BQ9P0W2 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
HMG20BQ9P0W2 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC20.39■□□□□ 0.85
HMG20BQ9P0W2 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HMG20BQ9P0W2 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
HMG20BQ9P0W2 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HMG20BQ9P0W2 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
HMG20BQ9P0W2 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
HMG20BQ9P0W2 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HMG20BQ9P0W2 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HMG20BQ9P0W2 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HMG20BQ9P0W2 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
HMG20BQ9P0W2 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
HMG20BQ9P0W2 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HMG20BQ9P0W2 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
HMG20BQ9P0W2 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC20.38■□□□□ 0.85
HMG20BQ9P0W2 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HMG20BQ9P0W2 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
HMG20BQ9P0W2 GOLGA6L17P-202ENST00000614358 1398 ntBASIC20.38■□□□□ 0.85
HMG20BQ9P0W2 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC20.38■□□□□ 0.85
HMG20BQ9P0W2 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HMG20BQ9P0W2 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HMG20BQ9P0W2 GATB-205ENST00000508611 605 ntTSL 2 BASIC20.38■□□□□ 0.85
HMG20BQ9P0W2 FAM86C2P-203ENST00000528684 1004 ntBASIC20.38■□□□□ 0.85
HMG20BQ9P0W2 AL135744.1-201ENST00000565098 629 ntBASIC20.38■□□□□ 0.85
HMG20BQ9P0W2 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HMG20BQ9P0W2 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC20.38■□□□□ 0.85
HMG20BQ9P0W2 AP001350.2-201ENST00000625104 1094 ntBASIC20.38■□□□□ 0.85
HMG20BQ9P0W2 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC20.38■□□□□ 0.85
HMG20BQ9P0W2 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HMG20BQ9P0W2 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HMG20BQ9P0W2 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
HMG20BQ9P0W2 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC20.38■□□□□ 0.85
HMG20BQ9P0W2 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
HMG20BQ9P0W2 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC20.38■□□□□ 0.85
HMG20BQ9P0W2 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
HMG20BQ9P0W2 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC20.38■□□□□ 0.85
HMG20BQ9P0W2 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms