Protein–RNA interactions for Protein: Q9NX36

DNAJC28, DnaJ homolog subfamily C member 28, humanhuman

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAJC28Q9NX36 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DNAJC28Q9NX36 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.11■□□□□ 0.33
DNAJC28Q9NX36 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DNAJC28Q9NX36 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.11■□□□□ 0.33
DNAJC28Q9NX36 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DNAJC28Q9NX36 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.11■□□□□ 0.33
DNAJC28Q9NX36 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DNAJC28Q9NX36 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DNAJC28Q9NX36 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
DNAJC28Q9NX36 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.11■□□□□ 0.33
DNAJC28Q9NX36 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DNAJC28Q9NX36 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DNAJC28Q9NX36 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DNAJC28Q9NX36 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DNAJC28Q9NX36 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
DNAJC28Q9NX36 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
DNAJC28Q9NX36 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
DNAJC28Q9NX36 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
DNAJC28Q9NX36 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DNAJC28Q9NX36 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
DNAJC28Q9NX36 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
DNAJC28Q9NX36 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.1■□□□□ 0.33
DNAJC28Q9NX36 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
DNAJC28Q9NX36 AL162727.3-201ENST00000635661 2787 ntBASIC17.1■□□□□ 0.33
DNAJC28Q9NX36 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DNAJC28Q9NX36 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DNAJC28Q9NX36 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DNAJC28Q9NX36 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DNAJC28Q9NX36 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DNAJC28Q9NX36 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DNAJC28Q9NX36 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
DNAJC28Q9NX36 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DNAJC28Q9NX36 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.1■□□□□ 0.33
DNAJC28Q9NX36 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
DNAJC28Q9NX36 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
DNAJC28Q9NX36 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
DNAJC28Q9NX36 PTCHD3P3-201ENST00000403073 906 ntBASIC17.1■□□□□ 0.33
DNAJC28Q9NX36 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.1■□□□□ 0.33
DNAJC28Q9NX36 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.1■□□□□ 0.33
DNAJC28Q9NX36 PRSS29P-201ENST00000440800 595 ntBASIC17.1■□□□□ 0.33
DNAJC28Q9NX36 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.1■□□□□ 0.33
DNAJC28Q9NX36 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
DNAJC28Q9NX36 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DNAJC28Q9NX36 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.1■□□□□ 0.33
DNAJC28Q9NX36 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DNAJC28Q9NX36 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.1■□□□□ 0.33
DNAJC28Q9NX36 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DNAJC28Q9NX36 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DNAJC28Q9NX36 AC002310.6-201ENST00000624451 1377 ntBASIC17.1■□□□□ 0.33
DNAJC28Q9NX36 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.1■□□□□ 0.33
DNAJC28Q9NX36 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DNAJC28Q9NX36 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
DNAJC28Q9NX36 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DNAJC28Q9NX36 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DNAJC28Q9NX36 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DNAJC28Q9NX36 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.09■□□□□ 0.33
DNAJC28Q9NX36 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DNAJC28Q9NX36 AC078925.2-201ENST00000624013 1973 ntBASIC17.09■□□□□ 0.33
DNAJC28Q9NX36 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.09■□□□□ 0.33
DNAJC28Q9NX36 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.09■□□□□ 0.33
DNAJC28Q9NX36 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
DNAJC28Q9NX36 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
DNAJC28Q9NX36 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
DNAJC28Q9NX36 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
DNAJC28Q9NX36 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
DNAJC28Q9NX36 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
DNAJC28Q9NX36 MRPL20P1-201ENST00000400819 433 ntBASIC17.09■□□□□ 0.33
DNAJC28Q9NX36 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.09■□□□□ 0.33
DNAJC28Q9NX36 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.09■□□□□ 0.33
DNAJC28Q9NX36 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.09■□□□□ 0.33
DNAJC28Q9NX36 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.09■□□□□ 0.33
DNAJC28Q9NX36 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.09■□□□□ 0.33
DNAJC28Q9NX36 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.09■□□□□ 0.33
DNAJC28Q9NX36 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.09■□□□□ 0.33
DNAJC28Q9NX36 AP001160.2-201ENST00000596071 487 ntBASIC17.09■□□□□ 0.33
DNAJC28Q9NX36 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.09■□□□□ 0.33
DNAJC28Q9NX36 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DNAJC28Q9NX36 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DNAJC28Q9NX36 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
DNAJC28Q9NX36 GPR89P-201ENST00000407924 1495 ntBASIC17.09■□□□□ 0.33
DNAJC28Q9NX36 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.09■□□□□ 0.33
DNAJC28Q9NX36 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.09■□□□□ 0.33
DNAJC28Q9NX36 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DNAJC28Q9NX36 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DNAJC28Q9NX36 AC093525.9-201ENST00000624961 1746 ntBASIC17.09■□□□□ 0.33
DNAJC28Q9NX36 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DNAJC28Q9NX36 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DNAJC28Q9NX36 AC092053.1-201ENST00000605787 1936 ntBASIC17.09■□□□□ 0.33
DNAJC28Q9NX36 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DNAJC28Q9NX36 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.09■□□□□ 0.33
DNAJC28Q9NX36 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
DNAJC28Q9NX36 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
DNAJC28Q9NX36 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
DNAJC28Q9NX36 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.08■□□□□ 0.33
DNAJC28Q9NX36 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
DNAJC28Q9NX36 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
DNAJC28Q9NX36 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.08■□□□□ 0.33
DNAJC28Q9NX36 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
DNAJC28Q9NX36 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
DNAJC28Q9NX36 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms