Protein–RNA interactions for Protein: Q9NPA1

KCNMB3, Calcium-activated potassium channel subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMB3Q9NPA1 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KCNMB3Q9NPA1 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
KCNMB3Q9NPA1 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KCNMB3Q9NPA1 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.8■□□□□ 0.6
KCNMB3Q9NPA1 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
KCNMB3Q9NPA1 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
KCNMB3Q9NPA1 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.8■□□□□ 0.6
KCNMB3Q9NPA1 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
KCNMB3Q9NPA1 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC18.8■□□□□ 0.6
KCNMB3Q9NPA1 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC18.8■□□□□ 0.6
KCNMB3Q9NPA1 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.8■□□□□ 0.6
KCNMB3Q9NPA1 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
KCNMB3Q9NPA1 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.8■□□□□ 0.6
KCNMB3Q9NPA1 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.8■□□□□ 0.6
KCNMB3Q9NPA1 INO80E-210ENST00000567705 880 ntTSL 3 BASIC18.8■□□□□ 0.6
KCNMB3Q9NPA1 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC18.8■□□□□ 0.6
KCNMB3Q9NPA1 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC18.8■□□□□ 0.6
KCNMB3Q9NPA1 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
KCNMB3Q9NPA1 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
KCNMB3Q9NPA1 AL161645.1-201ENST00000622716 1255 ntBASIC18.8■□□□□ 0.6
KCNMB3Q9NPA1 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KCNMB3Q9NPA1 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
KCNMB3Q9NPA1 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
KCNMB3Q9NPA1 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KCNMB3Q9NPA1 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.8■□□□□ 0.6
KCNMB3Q9NPA1 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
KCNMB3Q9NPA1 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC18.8■□□□□ 0.6
KCNMB3Q9NPA1 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC18.8■□□□□ 0.6
KCNMB3Q9NPA1 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC18.79■□□□□ 0.6
KCNMB3Q9NPA1 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
KCNMB3Q9NPA1 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC18.79■□□□□ 0.6
KCNMB3Q9NPA1 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KCNMB3Q9NPA1 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
KCNMB3Q9NPA1 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KCNMB3Q9NPA1 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
KCNMB3Q9NPA1 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC18.79■□□□□ 0.6
KCNMB3Q9NPA1 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.79■□□□□ 0.6
KCNMB3Q9NPA1 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KCNMB3Q9NPA1 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KCNMB3Q9NPA1 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
KCNMB3Q9NPA1 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
KCNMB3Q9NPA1 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
KCNMB3Q9NPA1 MIR3687-2-201ENST00000577708 61 ntBASIC18.79■□□□□ 0.6
KCNMB3Q9NPA1 MIR4469-201ENST00000583919 79 ntBASIC18.79■□□□□ 0.6
KCNMB3Q9NPA1 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
KCNMB3Q9NPA1 MIR3687-1-201ENST00000614492 61 ntBASIC18.79■□□□□ 0.6
KCNMB3Q9NPA1 AC055717.3-201ENST00000622967 595 ntBASIC18.79■□□□□ 0.6
KCNMB3Q9NPA1 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC18.79■□□□□ 0.6
KCNMB3Q9NPA1 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18.79■□□□□ 0.6
KCNMB3Q9NPA1 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
KCNMB3Q9NPA1 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.79■□□□□ 0.6
KCNMB3Q9NPA1 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
KCNMB3Q9NPA1 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
KCNMB3Q9NPA1 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.79■□□□□ 0.6
KCNMB3Q9NPA1 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KCNMB3Q9NPA1 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
KCNMB3Q9NPA1 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC18.78■□□□□ 0.6
KCNMB3Q9NPA1 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.78■□□□□ 0.6
KCNMB3Q9NPA1 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
KCNMB3Q9NPA1 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
KCNMB3Q9NPA1 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
KCNMB3Q9NPA1 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KCNMB3Q9NPA1 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
KCNMB3Q9NPA1 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KCNMB3Q9NPA1 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
KCNMB3Q9NPA1 CD82-202ENST00000342935 967 ntTSL 5 BASIC18.78■□□□□ 0.6
KCNMB3Q9NPA1 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
KCNMB3Q9NPA1 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC18.78■□□□□ 0.6
KCNMB3Q9NPA1 RARRES2P8-201ENST00000566335 367 ntBASIC18.78■□□□□ 0.6
KCNMB3Q9NPA1 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
KCNMB3Q9NPA1 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
KCNMB3Q9NPA1 AC016027.1-202ENST00000607927 1699 ntBASIC18.78■□□□□ 0.6
KCNMB3Q9NPA1 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
KCNMB3Q9NPA1 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC18.78■□□□□ 0.6
KCNMB3Q9NPA1 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC18.78■□□□□ 0.6
KCNMB3Q9NPA1 GPAA1P2-202ENST00000606848 1787 ntBASIC18.78■□□□□ 0.6
KCNMB3Q9NPA1 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
KCNMB3Q9NPA1 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KCNMB3Q9NPA1 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.77■□□□□ 0.6
KCNMB3Q9NPA1 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KCNMB3Q9NPA1 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
KCNMB3Q9NPA1 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
KCNMB3Q9NPA1 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.6
KCNMB3Q9NPA1 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
KCNMB3Q9NPA1 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
KCNMB3Q9NPA1 WASH6P-202ENST00000359512 1437 ntBASIC18.77■□□□□ 0.6
KCNMB3Q9NPA1 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
KCNMB3Q9NPA1 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.77■□□□□ 0.6
KCNMB3Q9NPA1 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
KCNMB3Q9NPA1 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KCNMB3Q9NPA1 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
KCNMB3Q9NPA1 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC18.77■□□□□ 0.6
KCNMB3Q9NPA1 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.77■□□□□ 0.6
KCNMB3Q9NPA1 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC18.77■□□□□ 0.6
KCNMB3Q9NPA1 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.77■□□□□ 0.6
KCNMB3Q9NPA1 PUS1-205ENST00000535067 838 ntTSL 3 BASIC18.77■□□□□ 0.6
KCNMB3Q9NPA1 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.77■□□□□ 0.6
KCNMB3Q9NPA1 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.77■□□□□ 0.6
KCNMB3Q9NPA1 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC18.77■□□□□ 0.6
KCNMB3Q9NPA1 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms