Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CBX8Q9HC52 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.81■□□□□ 0.6
CBX8Q9HC52 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CBX8Q9HC52 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
CBX8Q9HC52 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CBX8Q9HC52 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CBX8Q9HC52 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC18.81■□□□□ 0.6
CBX8Q9HC52 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CBX8Q9HC52 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CBX8Q9HC52 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CBX8Q9HC52 AC006449.6-201ENST00000612330 2296 ntBASIC18.8■□□□□ 0.6
CBX8Q9HC52 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.8■□□□□ 0.6
CBX8Q9HC52 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.8■□□□□ 0.6
CBX8Q9HC52 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.8■□□□□ 0.6
CBX8Q9HC52 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CBX8Q9HC52 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CBX8Q9HC52 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CBX8Q9HC52 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CBX8Q9HC52 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CBX8Q9HC52 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC18.8■□□□□ 0.6
CBX8Q9HC52 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CBX8Q9HC52 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CBX8Q9HC52 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.8■□□□□ 0.6
CBX8Q9HC52 AC005521.1-201ENST00000393351 872 ntBASIC18.8■□□□□ 0.6
CBX8Q9HC52 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.8■□□□□ 0.6
CBX8Q9HC52 AK4P3-201ENST00000418260 669 ntBASIC18.8■□□□□ 0.6
CBX8Q9HC52 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
CBX8Q9HC52 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
CBX8Q9HC52 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.8■□□□□ 0.6
CBX8Q9HC52 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.8■□□□□ 0.6
CBX8Q9HC52 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CBX8Q9HC52 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.8■□□□□ 0.6
CBX8Q9HC52 AC012306.2-201ENST00000609350 630 ntBASIC18.8■□□□□ 0.6
CBX8Q9HC52 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CBX8Q9HC52 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CBX8Q9HC52 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
CBX8Q9HC52 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CBX8Q9HC52 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CBX8Q9HC52 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CBX8Q9HC52 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CBX8Q9HC52 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CBX8Q9HC52 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CBX8Q9HC52 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CBX8Q9HC52 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CBX8Q9HC52 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CBX8Q9HC52 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CBX8Q9HC52 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CBX8Q9HC52 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CBX8Q9HC52 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CBX8Q9HC52 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CBX8Q9HC52 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC18.79■□□□□ 0.6
CBX8Q9HC52 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CBX8Q9HC52 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CBX8Q9HC52 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CBX8Q9HC52 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CBX8Q9HC52 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC18.79■□□□□ 0.6
CBX8Q9HC52 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CBX8Q9HC52 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CBX8Q9HC52 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CBX8Q9HC52 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CBX8Q9HC52 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CBX8Q9HC52 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CBX8Q9HC52 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
CBX8Q9HC52 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CBX8Q9HC52 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.79■□□□□ 0.6
CBX8Q9HC52 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.79■□□□□ 0.6
CBX8Q9HC52 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CBX8Q9HC52 KRT18P57-201ENST00000443599 1254 ntBASIC18.79■□□□□ 0.6
CBX8Q9HC52 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CBX8Q9HC52 SIGLEC30P-201ENST00000455569 941 ntBASIC18.79■□□□□ 0.6
CBX8Q9HC52 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CBX8Q9HC52 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CBX8Q9HC52 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CBX8Q9HC52 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CBX8Q9HC52 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CBX8Q9HC52 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.79■□□□□ 0.6
CBX8Q9HC52 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CBX8Q9HC52 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC18.79■□□□□ 0.6
CBX8Q9HC52 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC18.79■□□□□ 0.6
CBX8Q9HC52 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CBX8Q9HC52 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CBX8Q9HC52 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CBX8Q9HC52 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CBX8Q9HC52 AC097637.2-201ENST00000624096 1997 ntBASIC18.79■□□□□ 0.6
CBX8Q9HC52 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CBX8Q9HC52 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CBX8Q9HC52 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC18.78■□□□□ 0.6
CBX8Q9HC52 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC18.78■□□□□ 0.6
CBX8Q9HC52 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC18.78■□□□□ 0.6
CBX8Q9HC52 TP73-AS1-210ENST00000637775 1455 ntBASIC18.78■□□□□ 0.6
CBX8Q9HC52 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CBX8Q9HC52 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CBX8Q9HC52 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.78■□□□□ 0.6
CBX8Q9HC52 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CBX8Q9HC52 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC18.78■□□□□ 0.6
CBX8Q9HC52 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CBX8Q9HC52 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CBX8Q9HC52 AL512652.2-201ENST00000625156 1716 ntBASIC18.78■□□□□ 0.6
CBX8Q9HC52 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CBX8Q9HC52 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms