Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
LRTM1Q9HBL6 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
LRTM1Q9HBL6 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.2■□□□□ 0.18
LRTM1Q9HBL6 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRTM1Q9HBL6 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.2■□□□□ 0.18
LRTM1Q9HBL6 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
LRTM1Q9HBL6 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.2■□□□□ 0.18
LRTM1Q9HBL6 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.2■□□□□ 0.18
LRTM1Q9HBL6 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LRTM1Q9HBL6 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRTM1Q9HBL6 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRTM1Q9HBL6 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.2■□□□□ 0.18
LRTM1Q9HBL6 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRTM1Q9HBL6 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.19■□□□□ 0.18
LRTM1Q9HBL6 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.19■□□□□ 0.18
LRTM1Q9HBL6 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRTM1Q9HBL6 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.19■□□□□ 0.18
LRTM1Q9HBL6 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LRTM1Q9HBL6 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.19■□□□□ 0.18
LRTM1Q9HBL6 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.19■□□□□ 0.18
LRTM1Q9HBL6 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRTM1Q9HBL6 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LRTM1Q9HBL6 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRTM1Q9HBL6 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRTM1Q9HBL6 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.19■□□□□ 0.18
LRTM1Q9HBL6 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
LRTM1Q9HBL6 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.19■□□□□ 0.18
LRTM1Q9HBL6 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRTM1Q9HBL6 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.19■□□□□ 0.18
LRTM1Q9HBL6 TOP3BP1-201ENST00000420768 1380 ntBASIC16.19■□□□□ 0.18
LRTM1Q9HBL6 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRTM1Q9HBL6 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
LRTM1Q9HBL6 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRTM1Q9HBL6 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
LRTM1Q9HBL6 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LRTM1Q9HBL6 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.19■□□□□ 0.18
LRTM1Q9HBL6 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRTM1Q9HBL6 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
LRTM1Q9HBL6 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.19■□□□□ 0.18
LRTM1Q9HBL6 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LRTM1Q9HBL6 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.19■□□□□ 0.18
LRTM1Q9HBL6 AC139887.3-201ENST00000568585 713 ntBASIC16.19■□□□□ 0.18
LRTM1Q9HBL6 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.19■□□□□ 0.18
LRTM1Q9HBL6 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.19■□□□□ 0.18
LRTM1Q9HBL6 AL121772.3-201ENST00000610840 674 ntBASIC16.19■□□□□ 0.18
LRTM1Q9HBL6 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.19■□□□□ 0.18
LRTM1Q9HBL6 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRTM1Q9HBL6 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRTM1Q9HBL6 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LRTM1Q9HBL6 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.19■□□□□ 0.18
LRTM1Q9HBL6 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRTM1Q9HBL6 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRTM1Q9HBL6 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
LRTM1Q9HBL6 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LRTM1Q9HBL6 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRTM1Q9HBL6 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRTM1Q9HBL6 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRTM1Q9HBL6 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.19■□□□□ 0.18
LRTM1Q9HBL6 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRTM1Q9HBL6 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LRTM1Q9HBL6 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
LRTM1Q9HBL6 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LRTM1Q9HBL6 ME2P1-201ENST00000426028 1970 ntBASIC16.18■□□□□ 0.18
LRTM1Q9HBL6 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRTM1Q9HBL6 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRTM1Q9HBL6 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRTM1Q9HBL6 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRTM1Q9HBL6 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LRTM1Q9HBL6 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
LRTM1Q9HBL6 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRTM1Q9HBL6 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRTM1Q9HBL6 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.18■□□□□ 0.18
LRTM1Q9HBL6 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LRTM1Q9HBL6 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.18■□□□□ 0.18
LRTM1Q9HBL6 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRTM1Q9HBL6 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
LRTM1Q9HBL6 AL513523.2-202ENST00000427283 2040 ntBASIC16.18■□□□□ 0.18
LRTM1Q9HBL6 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRTM1Q9HBL6 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LRTM1Q9HBL6 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRTM1Q9HBL6 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRTM1Q9HBL6 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.18■□□□□ 0.18
LRTM1Q9HBL6 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.18■□□□□ 0.18
LRTM1Q9HBL6 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRTM1Q9HBL6 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.18■□□□□ 0.18
LRTM1Q9HBL6 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.18■□□□□ 0.18
LRTM1Q9HBL6 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.18■□□□□ 0.18
LRTM1Q9HBL6 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.18■□□□□ 0.18
LRTM1Q9HBL6 AL355877.3-201ENST00000622820 899 ntBASIC16.18■□□□□ 0.18
LRTM1Q9HBL6 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRTM1Q9HBL6 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRTM1Q9HBL6 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LRTM1Q9HBL6 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRTM1Q9HBL6 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRTM1Q9HBL6 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.18■□□□□ 0.18
LRTM1Q9HBL6 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LRTM1Q9HBL6 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
LRTM1Q9HBL6 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
LRTM1Q9HBL6 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRTM1Q9HBL6 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms