Protein–RNA interactions for Protein: Q9HB58

SP110, Sp110 nuclear body protein, humanhuman

Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP110Q9HB58 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SP110Q9HB58 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SP110Q9HB58 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
SP110Q9HB58 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.23■□□□□ 0.35
SP110Q9HB58 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.23■□□□□ 0.35
SP110Q9HB58 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SP110Q9HB58 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SP110Q9HB58 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SP110Q9HB58 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SP110Q9HB58 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
SP110Q9HB58 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SP110Q9HB58 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SP110Q9HB58 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.22■□□□□ 0.35
SP110Q9HB58 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.22■□□□□ 0.35
SP110Q9HB58 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SP110Q9HB58 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.22■□□□□ 0.35
SP110Q9HB58 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.22■□□□□ 0.35
SP110Q9HB58 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.22■□□□□ 0.35
SP110Q9HB58 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SP110Q9HB58 LINC00895-201ENST00000629028 1637 ntBASIC17.22■□□□□ 0.35
SP110Q9HB58 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SP110Q9HB58 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SP110Q9HB58 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SP110Q9HB58 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.22■□□□□ 0.35
SP110Q9HB58 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SP110Q9HB58 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
SP110Q9HB58 AL645728.1-201ENST00000366221 2101 ntBASIC17.22■□□□□ 0.35
SP110Q9HB58 AL513480.1-201ENST00000451731 511 ntBASIC17.22■□□□□ 0.35
SP110Q9HB58 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.22■□□□□ 0.35
SP110Q9HB58 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SP110Q9HB58 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.22■□□□□ 0.35
SP110Q9HB58 AC096734.2-201ENST00000562054 433 ntBASIC17.22■□□□□ 0.35
SP110Q9HB58 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.22■□□□□ 0.35
SP110Q9HB58 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.22■□□□□ 0.35
SP110Q9HB58 AP001350.2-201ENST00000625104 1094 ntBASIC17.22■□□□□ 0.35
SP110Q9HB58 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SP110Q9HB58 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SP110Q9HB58 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SP110Q9HB58 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SP110Q9HB58 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SP110Q9HB58 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SP110Q9HB58 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SP110Q9HB58 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SP110Q9HB58 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SP110Q9HB58 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.22■□□□□ 0.35
SP110Q9HB58 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SP110Q9HB58 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.22■□□□□ 0.35
SP110Q9HB58 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SP110Q9HB58 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SP110Q9HB58 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SP110Q9HB58 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SP110Q9HB58 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.21■□□□□ 0.35
SP110Q9HB58 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SP110Q9HB58 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.21■□□□□ 0.35
SP110Q9HB58 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SP110Q9HB58 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SP110Q9HB58 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SP110Q9HB58 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SP110Q9HB58 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.21■□□□□ 0.35
SP110Q9HB58 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SP110Q9HB58 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SP110Q9HB58 SLC22A20-204ENST00000530038 1673 ntBASIC17.21■□□□□ 0.35
SP110Q9HB58 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.21■□□□□ 0.35
SP110Q9HB58 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SP110Q9HB58 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SP110Q9HB58 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SP110Q9HB58 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
SP110Q9HB58 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SP110Q9HB58 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
SP110Q9HB58 MIR940-201ENST00000401276 94 ntBASIC17.21■□□□□ 0.35
SP110Q9HB58 HCG4-201ENST00000418983 998 ntBASIC17.21■□□□□ 0.35
SP110Q9HB58 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SP110Q9HB58 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.21■□□□□ 0.35
SP110Q9HB58 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SP110Q9HB58 KRT18P3-201ENST00000451602 1288 ntBASIC17.21■□□□□ 0.35
SP110Q9HB58 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SP110Q9HB58 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.21■□□□□ 0.35
SP110Q9HB58 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SP110Q9HB58 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.21■□□□□ 0.35
SP110Q9HB58 AC087641.1-201ENST00000557561 1021 ntBASIC17.21■□□□□ 0.35
SP110Q9HB58 AC018845.2-201ENST00000568326 409 ntBASIC17.21■□□□□ 0.35
SP110Q9HB58 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SP110Q9HB58 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SP110Q9HB58 FAM197Y3-203ENST00000618346 717 ntBASIC17.21■□□□□ 0.35
SP110Q9HB58 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SP110Q9HB58 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SP110Q9HB58 RNF216P1-203ENST00000404404 2427 ntBASIC17.21■□□□□ 0.35
SP110Q9HB58 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SP110Q9HB58 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SP110Q9HB58 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SP110Q9HB58 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.21■□□□□ 0.35
SP110Q9HB58 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
SP110Q9HB58 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SP110Q9HB58 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
SP110Q9HB58 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SP110Q9HB58 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
SP110Q9HB58 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SP110Q9HB58 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SP110Q9HB58 AC006277.1-201ENST00000624348 1610 ntBASIC17.21■□□□□ 0.35
SP110Q9HB58 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms