Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.08■□□□□ 0.33
LRRC40Q9H9A6 AC006449.5-201ENST00000610658 2098 ntBASIC17.08■□□□□ 0.33
LRRC40Q9H9A6 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LRRC40Q9H9A6 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LRRC40Q9H9A6 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
LRRC40Q9H9A6 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LRRC40Q9H9A6 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
LRRC40Q9H9A6 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.08■□□□□ 0.33
LRRC40Q9H9A6 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.32
LRRC40Q9H9A6 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LRRC40Q9H9A6 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
LRRC40Q9H9A6 RPS2P28-201ENST00000314255 741 ntBASIC17.08■□□□□ 0.32
LRRC40Q9H9A6 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRRC40Q9H9A6 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.08■□□□□ 0.32
LRRC40Q9H9A6 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.08■□□□□ 0.32
LRRC40Q9H9A6 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRRC40Q9H9A6 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.08■□□□□ 0.32
LRRC40Q9H9A6 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.08■□□□□ 0.32
LRRC40Q9H9A6 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.08■□□□□ 0.32
LRRC40Q9H9A6 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.08■□□□□ 0.32
LRRC40Q9H9A6 AC105339.3-201ENST00000560043 636 ntBASIC17.08■□□□□ 0.32
LRRC40Q9H9A6 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.08■□□□□ 0.32
LRRC40Q9H9A6 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LRRC40Q9H9A6 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.08■□□□□ 0.32
LRRC40Q9H9A6 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LRRC40Q9H9A6 PGM5P2-202ENST00000637225 1043 ntBASIC17.08■□□□□ 0.32
LRRC40Q9H9A6 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.32
LRRC40Q9H9A6 DOC2GP-204ENST00000639052 2548 ntBASIC17.08■□□□□ 0.32
LRRC40Q9H9A6 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.07■□□□□ 0.32
LRRC40Q9H9A6 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRRC40Q9H9A6 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
LRRC40Q9H9A6 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.07■□□□□ 0.32
LRRC40Q9H9A6 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
LRRC40Q9H9A6 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.07■□□□□ 0.32
LRRC40Q9H9A6 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.07■□□□□ 0.32
LRRC40Q9H9A6 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRRC40Q9H9A6 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRRC40Q9H9A6 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRRC40Q9H9A6 AC004870.1-201ENST00000315132 882 ntBASIC17.07■□□□□ 0.32
LRRC40Q9H9A6 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.07■□□□□ 0.32
LRRC40Q9H9A6 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
LRRC40Q9H9A6 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.07■□□□□ 0.32
LRRC40Q9H9A6 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.07■□□□□ 0.32
LRRC40Q9H9A6 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
LRRC40Q9H9A6 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.07■□□□□ 0.32
LRRC40Q9H9A6 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
LRRC40Q9H9A6 MIR4492-201ENST00000581627 80 ntBASIC17.07■□□□□ 0.32
LRRC40Q9H9A6 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.07■□□□□ 0.32
LRRC40Q9H9A6 AL356488.2-201ENST00000602755 427 ntBASIC17.07■□□□□ 0.32
LRRC40Q9H9A6 AC008667.4-201ENST00000607370 168 ntBASIC17.07■□□□□ 0.32
LRRC40Q9H9A6 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.07■□□□□ 0.32
LRRC40Q9H9A6 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRRC40Q9H9A6 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
LRRC40Q9H9A6 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
LRRC40Q9H9A6 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
LRRC40Q9H9A6 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRRC40Q9H9A6 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
LRRC40Q9H9A6 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
LRRC40Q9H9A6 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
LRRC40Q9H9A6 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
LRRC40Q9H9A6 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC40Q9H9A6 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC40Q9H9A6 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC40Q9H9A6 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC40Q9H9A6 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.06■□□□□ 0.32
LRRC40Q9H9A6 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC40Q9H9A6 AC018695.7-201ENST00000624587 2492 ntBASIC17.06■□□□□ 0.32
LRRC40Q9H9A6 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC40Q9H9A6 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
LRRC40Q9H9A6 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC40Q9H9A6 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC40Q9H9A6 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC40Q9H9A6 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.06■□□□□ 0.32
LRRC40Q9H9A6 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.06■□□□□ 0.32
LRRC40Q9H9A6 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.06■□□□□ 0.32
LRRC40Q9H9A6 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.06■□□□□ 0.32
LRRC40Q9H9A6 HNRNPDP1-201ENST00000439535 754 ntBASIC17.06■□□□□ 0.32
LRRC40Q9H9A6 FAAHP1-202ENST00000446499 1238 ntBASIC17.06■□□□□ 0.32
LRRC40Q9H9A6 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.06■□□□□ 0.32
LRRC40Q9H9A6 IGHV3-65-201ENST00000523210 341 ntBASIC17.06■□□□□ 0.32
LRRC40Q9H9A6 AC107918.2-201ENST00000530817 355 ntBASIC17.06■□□□□ 0.32
LRRC40Q9H9A6 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.06■□□□□ 0.32
LRRC40Q9H9A6 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.06■□□□□ 0.32
LRRC40Q9H9A6 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC40Q9H9A6 RN7SL510P-201ENST00000581311 263 ntBASIC17.06■□□□□ 0.32
LRRC40Q9H9A6 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC40Q9H9A6 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.06■□□□□ 0.32
LRRC40Q9H9A6 AL691432.3-201ENST00000621860 400 ntBASIC17.06■□□□□ 0.32
LRRC40Q9H9A6 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC40Q9H9A6 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.06■□□□□ 0.32
LRRC40Q9H9A6 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC40Q9H9A6 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.06■□□□□ 0.32
LRRC40Q9H9A6 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.06■□□□□ 0.32
LRRC40Q9H9A6 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC40Q9H9A6 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC40Q9H9A6 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.06■□□□□ 0.32
LRRC40Q9H9A6 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC40Q9H9A6 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
LRRC40Q9H9A6 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.06■□□□□ 0.32
LRRC40Q9H9A6 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms