Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RNF41Q9H4P4 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF41Q9H4P4 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RNF41Q9H4P4 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF41Q9H4P4 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF41Q9H4P4 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
RNF41Q9H4P4 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC19.78■□□□□ 0.76
RNF41Q9H4P4 AC006538.1-201ENST00000567905 1585 ntBASIC19.78■□□□□ 0.76
RNF41Q9H4P4 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RNF41Q9H4P4 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF41Q9H4P4 AMT-206ENST00000458307 1860 ntTSL 2 BASIC19.77■□□□□ 0.76
RNF41Q9H4P4 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RNF41Q9H4P4 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF41Q9H4P4 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
RNF41Q9H4P4 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF41Q9H4P4 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RNF41Q9H4P4 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF41Q9H4P4 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF41Q9H4P4 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF41Q9H4P4 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RNF41Q9H4P4 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC19.77■□□□□ 0.76
RNF41Q9H4P4 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF41Q9H4P4 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF41Q9H4P4 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RNF41Q9H4P4 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF41Q9H4P4 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
RNF41Q9H4P4 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF41Q9H4P4 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF41Q9H4P4 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF41Q9H4P4 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF41Q9H4P4 COA5-202ENST00000409997 557 ntTSL 4 BASIC19.77■□□□□ 0.76
RNF41Q9H4P4 AC092474.2-201ENST00000424288 719 ntBASIC19.77■□□□□ 0.76
RNF41Q9H4P4 HTR5BP-201ENST00000430851 1154 ntBASIC19.77■□□□□ 0.76
RNF41Q9H4P4 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF41Q9H4P4 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF41Q9H4P4 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC19.77■□□□□ 0.76
RNF41Q9H4P4 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF41Q9H4P4 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RNF41Q9H4P4 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC19.77■□□□□ 0.76
RNF41Q9H4P4 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.77■□□□□ 0.76
RNF41Q9H4P4 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
RNF41Q9H4P4 AC005829.1-201ENST00000570002 483 ntBASIC19.77■□□□□ 0.76
RNF41Q9H4P4 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC19.77■□□□□ 0.76
RNF41Q9H4P4 AL161645.1-201ENST00000622716 1255 ntBASIC19.77■□□□□ 0.76
RNF41Q9H4P4 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
RNF41Q9H4P4 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF41Q9H4P4 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
RNF41Q9H4P4 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF41Q9H4P4 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF41Q9H4P4 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RNF41Q9H4P4 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC19.77■□□□□ 0.76
RNF41Q9H4P4 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC19.77■□□□□ 0.75
RNF41Q9H4P4 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
RNF41Q9H4P4 LTB4R2-202ENST00000528054 3092 ntBASIC19.77■□□□□ 0.75
RNF41Q9H4P4 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.76■□□□□ 0.75
RNF41Q9H4P4 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RNF41Q9H4P4 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF41Q9H4P4 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
RNF41Q9H4P4 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF41Q9H4P4 AC106886.4-201ENST00000623557 2502 ntBASIC19.76■□□□□ 0.75
RNF41Q9H4P4 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF41Q9H4P4 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.76■□□□□ 0.75
RNF41Q9H4P4 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF41Q9H4P4 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC19.76■□□□□ 0.75
RNF41Q9H4P4 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RNF41Q9H4P4 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
RNF41Q9H4P4 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF41Q9H4P4 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC19.76■□□□□ 0.75
RNF41Q9H4P4 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC19.76■□□□□ 0.75
RNF41Q9H4P4 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
RNF41Q9H4P4 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF41Q9H4P4 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF41Q9H4P4 RPSAP43-201ENST00000402237 625 ntBASIC19.76■□□□□ 0.75
RNF41Q9H4P4 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC19.76■□□□□ 0.75
RNF41Q9H4P4 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC19.76■□□□□ 0.75
RNF41Q9H4P4 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RNF41Q9H4P4 AC010327.4-202ENST00000591484 748 ntBASIC19.76■□□□□ 0.75
RNF41Q9H4P4 AL078644.1-201ENST00000609881 752 ntBASIC19.76■□□□□ 0.75
RNF41Q9H4P4 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC19.76■□□□□ 0.75
RNF41Q9H4P4 RNF216P1-203ENST00000404404 2427 ntBASIC19.76■□□□□ 0.75
RNF41Q9H4P4 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF41Q9H4P4 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
RNF41Q9H4P4 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RNF41Q9H4P4 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF41Q9H4P4 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF41Q9H4P4 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF41Q9H4P4 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RNF41Q9H4P4 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
RNF41Q9H4P4 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RNF41Q9H4P4 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RNF41Q9H4P4 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC19.76■□□□□ 0.75
RNF41Q9H4P4 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF41Q9H4P4 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RNF41Q9H4P4 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF41Q9H4P4 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
RNF41Q9H4P4 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
RNF41Q9H4P4 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
RNF41Q9H4P4 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
RNF41Q9H4P4 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF41Q9H4P4 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms