Protein–RNA interactions for Protein: Q9BW85

CCDC94, Coiled-coil domain-containing protein 94, humanhuman

Predicted RBP Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC94Q9BW85 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC94Q9BW85 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC94Q9BW85 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC19.12■□□□□ 0.65
CCDC94Q9BW85 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC94Q9BW85 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC94Q9BW85 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC94Q9BW85 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19.12■□□□□ 0.65
CCDC94Q9BW85 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC94Q9BW85 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CCDC94Q9BW85 AC093909.1-201ENST00000504731 1122 ntBASIC19.12■□□□□ 0.65
CCDC94Q9BW85 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC94Q9BW85 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC19.12■□□□□ 0.65
CCDC94Q9BW85 WDR88-203ENST00000592765 651 ntTSL 5 BASIC19.12■□□□□ 0.65
CCDC94Q9BW85 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC19.12■□□□□ 0.65
CCDC94Q9BW85 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.12■□□□□ 0.65
CCDC94Q9BW85 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CCDC94Q9BW85 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC94Q9BW85 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC94Q9BW85 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC94Q9BW85 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
CCDC94Q9BW85 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC94Q9BW85 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC94Q9BW85 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC94Q9BW85 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC94Q9BW85 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CCDC94Q9BW85 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC94Q9BW85 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC94Q9BW85 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC94Q9BW85 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC94Q9BW85 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CCDC94Q9BW85 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC94Q9BW85 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC94Q9BW85 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CCDC94Q9BW85 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC94Q9BW85 AL355312.1-201ENST00000407115 2176 ntBASIC19.11■□□□□ 0.65
CCDC94Q9BW85 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC94Q9BW85 RPS2P28-201ENST00000314255 741 ntBASIC19.11■□□□□ 0.65
CCDC94Q9BW85 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC94Q9BW85 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CCDC94Q9BW85 RAB17-203ENST00000409576 466 ntTSL 3 BASIC19.11■□□□□ 0.65
CCDC94Q9BW85 KLF4P1-201ENST00000412782 1185 ntBASIC19.11■□□□□ 0.65
CCDC94Q9BW85 AC002558.1-201ENST00000488906 803 ntBASIC19.11■□□□□ 0.65
CCDC94Q9BW85 MSRA-206ENST00000521209 814 ntTSL 3 BASIC19.11■□□□□ 0.65
CCDC94Q9BW85 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC19.11■□□□□ 0.65
CCDC94Q9BW85 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC94Q9BW85 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.11■□□□□ 0.65
CCDC94Q9BW85 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CCDC94Q9BW85 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC94Q9BW85 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC94Q9BW85 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC94Q9BW85 AC144831.1-201ENST00000573312 2656 ntBASIC19.11■□□□□ 0.65
CCDC94Q9BW85 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
CCDC94Q9BW85 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC94Q9BW85 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC94Q9BW85 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC94Q9BW85 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
CCDC94Q9BW85 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC94Q9BW85 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CCDC94Q9BW85 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC94Q9BW85 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC94Q9BW85 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC94Q9BW85 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC94Q9BW85 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC94Q9BW85 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.1■□□□□ 0.65
CCDC94Q9BW85 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC94Q9BW85 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC94Q9BW85 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
CCDC94Q9BW85 AC092068.3-201ENST00000587894 2016 ntBASIC19.1■□□□□ 0.65
CCDC94Q9BW85 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC94Q9BW85 SIGLEC16-201ENST00000599858 1437 ntBASIC19.1■□□□□ 0.65
CCDC94Q9BW85 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CCDC94Q9BW85 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.1■□□□□ 0.65
CCDC94Q9BW85 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CCDC94Q9BW85 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC94Q9BW85 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC94Q9BW85 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC94Q9BW85 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC94Q9BW85 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC94Q9BW85 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC94Q9BW85 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC94Q9BW85 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
CCDC94Q9BW85 AC003669.1-201ENST00000334569 611 ntBASIC19.1■□□□□ 0.65
CCDC94Q9BW85 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC94Q9BW85 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.1■□□□□ 0.65
CCDC94Q9BW85 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CCDC94Q9BW85 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC94Q9BW85 SPDYE21P-201ENST00000413323 827 ntBASIC19.1■□□□□ 0.65
CCDC94Q9BW85 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC19.1■□□□□ 0.65
CCDC94Q9BW85 BX005266.1-201ENST00000473402 457 ntBASIC19.1■□□□□ 0.65
CCDC94Q9BW85 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC94Q9BW85 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC94Q9BW85 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
CCDC94Q9BW85 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC19.1■□□□□ 0.65
CCDC94Q9BW85 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC94Q9BW85 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC94Q9BW85 MTDHP4-201ENST00000600287 670 ntBASIC19.1■□□□□ 0.65
CCDC94Q9BW85 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC94Q9BW85 AC073592.4-201ENST00000623827 446 ntBASIC19.1■□□□□ 0.65
CCDC94Q9BW85 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CCDC94Q9BW85 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms