Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TRAF4Q9BUZ4 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
TRAF4Q9BUZ4 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAF4Q9BUZ4 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAF4Q9BUZ4 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAF4Q9BUZ4 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAF4Q9BUZ4 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAF4Q9BUZ4 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.1■□□□□ 0.01
TRAF4Q9BUZ4 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAF4Q9BUZ4 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAF4Q9BUZ4 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAF4Q9BUZ4 BX005266.1-201ENST00000473402 457 ntBASIC15.1■□□□□ 0.01
TRAF4Q9BUZ4 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.1■□□□□ 0.01
TRAF4Q9BUZ4 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAF4Q9BUZ4 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.1■□□□□ 0.01
TRAF4Q9BUZ4 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.1■□□□□ 0.01
TRAF4Q9BUZ4 AC027601.4-201ENST00000611259 610 ntBASIC15.1■□□□□ 0.01
TRAF4Q9BUZ4 AD001527.2-201ENST00000622994 785 ntBASIC15.1■□□□□ 0.01
TRAF4Q9BUZ4 AL022326.1-202ENST00000641533 845 ntBASIC15.1■□□□□ 0.01
TRAF4Q9BUZ4 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAF4Q9BUZ4 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAF4Q9BUZ4 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.1■□□□□ 0.01
TRAF4Q9BUZ4 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAF4Q9BUZ4 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAF4Q9BUZ4 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TRAF4Q9BUZ4 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TRAF4Q9BUZ4 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAF4Q9BUZ4 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAF4Q9BUZ4 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAF4Q9BUZ4 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
TRAF4Q9BUZ4 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAF4Q9BUZ4 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAF4Q9BUZ4 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAF4Q9BUZ4 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAF4Q9BUZ4 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAF4Q9BUZ4 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.1■□□□□ 0.01
TRAF4Q9BUZ4 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAF4Q9BUZ4 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAF4Q9BUZ4 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
TRAF4Q9BUZ4 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAF4Q9BUZ4 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAF4Q9BUZ4 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAF4Q9BUZ4 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAF4Q9BUZ4 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAF4Q9BUZ4 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAF4Q9BUZ4 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAF4Q9BUZ4 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
TRAF4Q9BUZ4 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAF4Q9BUZ4 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
TRAF4Q9BUZ4 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAF4Q9BUZ4 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAF4Q9BUZ4 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAF4Q9BUZ4 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAF4Q9BUZ4 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
TRAF4Q9BUZ4 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAF4Q9BUZ4 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAF4Q9BUZ4 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.09■□□□□ 0.01
TRAF4Q9BUZ4 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
TRAF4Q9BUZ4 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
TRAF4Q9BUZ4 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAF4Q9BUZ4 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.09■□□□□ 0.01
TRAF4Q9BUZ4 BX842568.4-201ENST00000421222 227 ntBASIC15.09■□□□□ 0.01
TRAF4Q9BUZ4 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.09■□□□□ 0.01
TRAF4Q9BUZ4 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAF4Q9BUZ4 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAF4Q9BUZ4 AC103564.2-201ENST00000432853 1299 ntBASIC15.09■□□□□ 0.01
TRAF4Q9BUZ4 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.09■□□□□ 0.01
TRAF4Q9BUZ4 RNA5SP415-201ENST00000517246 115 ntBASIC15.09■□□□□ 0.01
TRAF4Q9BUZ4 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAF4Q9BUZ4 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.09■□□□□ 0.01
TRAF4Q9BUZ4 AC034105.1-201ENST00000563488 319 ntBASIC15.09■□□□□ 0.01
TRAF4Q9BUZ4 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
TRAF4Q9BUZ4 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAF4Q9BUZ4 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
TRAF4Q9BUZ4 Z83851.2-201ENST00000609564 659 ntBASIC15.09■□□□□ 0.01
TRAF4Q9BUZ4 AC073592.4-201ENST00000623827 446 ntBASIC15.09■□□□□ 0.01
TRAF4Q9BUZ4 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAF4Q9BUZ4 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
TRAF4Q9BUZ4 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAF4Q9BUZ4 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAF4Q9BUZ4 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAF4Q9BUZ4 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
TRAF4Q9BUZ4 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAF4Q9BUZ4 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAF4Q9BUZ4 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAF4Q9BUZ4 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
TRAF4Q9BUZ4 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAF4Q9BUZ4 C8orf49-201ENST00000525043 1968 ntBASIC15.09■□□□□ 0.01
TRAF4Q9BUZ4 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
TRAF4Q9BUZ4 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAF4Q9BUZ4 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAF4Q9BUZ4 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
TRAF4Q9BUZ4 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRAF4Q9BUZ4 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
TRAF4Q9BUZ4 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRAF4Q9BUZ4 AC132872.4-202ENST00000622924 2756 ntBASIC15.08■□□□□ 0.01
TRAF4Q9BUZ4 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRAF4Q9BUZ4 LINC00304-203ENST00000565008 1864 ntBASIC15.08■□□□□ 0.01
TRAF4Q9BUZ4 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.08■□□□□ 0
TRAF4Q9BUZ4 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms