Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.08□□□□□ -0.32
NDUFAF3Q9BU61 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC13.08□□□□□ -0.32
NDUFAF3Q9BU61 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
NDUFAF3Q9BU61 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
NDUFAF3Q9BU61 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NDUFAF3Q9BU61 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
NDUFAF3Q9BU61 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC13.08□□□□□ -0.32
NDUFAF3Q9BU61 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC13.08□□□□□ -0.32
NDUFAF3Q9BU61 PRAL-201ENST00000624952 3286 ntBASIC13.08□□□□□ -0.32
NDUFAF3Q9BU61 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
NDUFAF3Q9BU61 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NDUFAF3Q9BU61 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NDUFAF3Q9BU61 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NDUFAF3Q9BU61 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NDUFAF3Q9BU61 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
NDUFAF3Q9BU61 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC13.08□□□□□ -0.32
NDUFAF3Q9BU61 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC13.08□□□□□ -0.32
NDUFAF3Q9BU61 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC13.08□□□□□ -0.32
NDUFAF3Q9BU61 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC13.08□□□□□ -0.32
NDUFAF3Q9BU61 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NDUFAF3Q9BU61 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
NDUFAF3Q9BU61 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
NDUFAF3Q9BU61 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NDUFAF3Q9BU61 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
NDUFAF3Q9BU61 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NDUFAF3Q9BU61 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NDUFAF3Q9BU61 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NDUFAF3Q9BU61 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NDUFAF3Q9BU61 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NDUFAF3Q9BU61 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
NDUFAF3Q9BU61 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NDUFAF3Q9BU61 AC022898.2-201ENST00000616822 1312 ntBASIC13.08□□□□□ -0.32
NDUFAF3Q9BU61 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NDUFAF3Q9BU61 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC13.08□□□□□ -0.32
NDUFAF3Q9BU61 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
NDUFAF3Q9BU61 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
NDUFAF3Q9BU61 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NDUFAF3Q9BU61 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NDUFAF3Q9BU61 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC13.08□□□□□ -0.32
NDUFAF3Q9BU61 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC13.08□□□□□ -0.32
NDUFAF3Q9BU61 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
NDUFAF3Q9BU61 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
NDUFAF3Q9BU61 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NDUFAF3Q9BU61 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
NDUFAF3Q9BU61 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
NDUFAF3Q9BU61 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
NDUFAF3Q9BU61 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
NDUFAF3Q9BU61 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NDUFAF3Q9BU61 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC13.07□□□□□ -0.32
NDUFAF3Q9BU61 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
NDUFAF3Q9BU61 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NDUFAF3Q9BU61 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
NDUFAF3Q9BU61 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
NDUFAF3Q9BU61 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NDUFAF3Q9BU61 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
NDUFAF3Q9BU61 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC13.07□□□□□ -0.32
NDUFAF3Q9BU61 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
NDUFAF3Q9BU61 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.07□□□□□ -0.32
NDUFAF3Q9BU61 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NDUFAF3Q9BU61 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.07□□□□□ -0.32
NDUFAF3Q9BU61 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NDUFAF3Q9BU61 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NDUFAF3Q9BU61 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NDUFAF3Q9BU61 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
NDUFAF3Q9BU61 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NDUFAF3Q9BU61 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NDUFAF3Q9BU61 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NDUFAF3Q9BU61 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
NDUFAF3Q9BU61 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC13.07□□□□□ -0.32
NDUFAF3Q9BU61 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC13.07□□□□□ -0.32
NDUFAF3Q9BU61 SPDYE15P-201ENST00000424157 909 ntBASIC13.07□□□□□ -0.32
NDUFAF3Q9BU61 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NDUFAF3Q9BU61 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC13.07□□□□□ -0.32
NDUFAF3Q9BU61 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC13.07□□□□□ -0.32
NDUFAF3Q9BU61 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC13.07□□□□□ -0.32
NDUFAF3Q9BU61 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NDUFAF3Q9BU61 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
NDUFAF3Q9BU61 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC13.07□□□□□ -0.32
NDUFAF3Q9BU61 AC010240.3-201ENST00000607688 395 ntBASIC13.07□□□□□ -0.32
NDUFAF3Q9BU61 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC13.07□□□□□ -0.32
NDUFAF3Q9BU61 AC116407.4-201ENST00000623319 1061 ntBASIC13.07□□□□□ -0.32
NDUFAF3Q9BU61 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NDUFAF3Q9BU61 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.07□□□□□ -0.32
NDUFAF3Q9BU61 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NDUFAF3Q9BU61 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NDUFAF3Q9BU61 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC13.07□□□□□ -0.32
NDUFAF3Q9BU61 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NDUFAF3Q9BU61 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NDUFAF3Q9BU61 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NDUFAF3Q9BU61 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC13.07□□□□□ -0.32
NDUFAF3Q9BU61 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NDUFAF3Q9BU61 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC13.07□□□□□ -0.32
NDUFAF3Q9BU61 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NDUFAF3Q9BU61 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC13.07□□□□□ -0.32
NDUFAF3Q9BU61 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NDUFAF3Q9BU61 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NDUFAF3Q9BU61 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NDUFAF3Q9BU61 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NDUFAF3Q9BU61 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
NDUFAF3Q9BU61 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms