Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
UPK3BQ9BT76 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
UPK3BQ9BT76 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC11.76□□□□□ -0.53
UPK3BQ9BT76 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UPK3BQ9BT76 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
UPK3BQ9BT76 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC11.76□□□□□ -0.53
UPK3BQ9BT76 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UPK3BQ9BT76 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UPK3BQ9BT76 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC11.76□□□□□ -0.53
UPK3BQ9BT76 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
UPK3BQ9BT76 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
UPK3BQ9BT76 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
UPK3BQ9BT76 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC11.76□□□□□ -0.53
UPK3BQ9BT76 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
UPK3BQ9BT76 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UPK3BQ9BT76 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
UPK3BQ9BT76 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
UPK3BQ9BT76 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
UPK3BQ9BT76 AC004832.2-201ENST00000426397 482 ntBASIC11.76□□□□□ -0.53
UPK3BQ9BT76 AC007967.2-201ENST00000432613 625 ntBASIC11.76□□□□□ -0.53
UPK3BQ9BT76 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC11.76□□□□□ -0.53
UPK3BQ9BT76 DNAJB3-201ENST00000446806 729 ntBASIC11.76□□□□□ -0.53
UPK3BQ9BT76 HCG4B-203ENST00000450128 991 ntBASIC11.76□□□□□ -0.53
UPK3BQ9BT76 PAWRP1-201ENST00000451083 565 ntBASIC11.76□□□□□ -0.53
UPK3BQ9BT76 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC11.76□□□□□ -0.53
UPK3BQ9BT76 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC11.76□□□□□ -0.53
UPK3BQ9BT76 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC11.76□□□□□ -0.53
UPK3BQ9BT76 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UPK3BQ9BT76 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC11.76□□□□□ -0.53
UPK3BQ9BT76 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC11.76□□□□□ -0.53
UPK3BQ9BT76 AC004790.2-201ENST00000623588 572 ntBASIC11.76□□□□□ -0.53
UPK3BQ9BT76 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC11.76□□□□□ -0.53
UPK3BQ9BT76 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UPK3BQ9BT76 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC11.76□□□□□ -0.53
UPK3BQ9BT76 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC11.76□□□□□ -0.53
UPK3BQ9BT76 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC11.76□□□□□ -0.53
UPK3BQ9BT76 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UPK3BQ9BT76 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
UPK3BQ9BT76 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC11.76□□□□□ -0.53
UPK3BQ9BT76 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
UPK3BQ9BT76 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
UPK3BQ9BT76 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
UPK3BQ9BT76 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
UPK3BQ9BT76 AC002310.6-201ENST00000624451 1377 ntBASIC11.76□□□□□ -0.53
UPK3BQ9BT76 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
UPK3BQ9BT76 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC11.76□□□□□ -0.53
UPK3BQ9BT76 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
UPK3BQ9BT76 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
UPK3BQ9BT76 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
UPK3BQ9BT76 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UPK3BQ9BT76 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC11.76□□□□□ -0.53
UPK3BQ9BT76 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
UPK3BQ9BT76 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
UPK3BQ9BT76 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UPK3BQ9BT76 AL138688.1-201ENST00000624851 1594 ntBASIC11.75□□□□□ -0.53
UPK3BQ9BT76 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UPK3BQ9BT76 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
UPK3BQ9BT76 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UPK3BQ9BT76 LINC00896-202ENST00000609602 2128 ntBASIC11.75□□□□□ -0.53
UPK3BQ9BT76 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
UPK3BQ9BT76 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UPK3BQ9BT76 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
UPK3BQ9BT76 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC11.75□□□□□ -0.53
UPK3BQ9BT76 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UPK3BQ9BT76 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
UPK3BQ9BT76 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
UPK3BQ9BT76 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC11.75□□□□□ -0.53
UPK3BQ9BT76 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC11.75□□□□□ -0.53
UPK3BQ9BT76 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC11.75□□□□□ -0.53
UPK3BQ9BT76 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UPK3BQ9BT76 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
UPK3BQ9BT76 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
UPK3BQ9BT76 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC11.75□□□□□ -0.53
UPK3BQ9BT76 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC11.75□□□□□ -0.53
UPK3BQ9BT76 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
UPK3BQ9BT76 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
UPK3BQ9BT76 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC11.75□□□□□ -0.53
UPK3BQ9BT76 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
UPK3BQ9BT76 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC11.75□□□□□ -0.53
UPK3BQ9BT76 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC11.75□□□□□ -0.53
UPK3BQ9BT76 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC11.75□□□□□ -0.53
UPK3BQ9BT76 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
UPK3BQ9BT76 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC11.75□□□□□ -0.53
UPK3BQ9BT76 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC11.75□□□□□ -0.53
UPK3BQ9BT76 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC11.75□□□□□ -0.53
UPK3BQ9BT76 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UPK3BQ9BT76 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
UPK3BQ9BT76 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
UPK3BQ9BT76 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC11.75□□□□□ -0.53
UPK3BQ9BT76 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
UPK3BQ9BT76 AD000864.1-201ENST00000624076 2295 ntBASIC11.75□□□□□ -0.53
UPK3BQ9BT76 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
UPK3BQ9BT76 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
UPK3BQ9BT76 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC11.75□□□□□ -0.53
UPK3BQ9BT76 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UPK3BQ9BT76 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UPK3BQ9BT76 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
UPK3BQ9BT76 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC11.74□□□□□ -0.53
UPK3BQ9BT76 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC11.74□□□□□ -0.53
UPK3BQ9BT76 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms