Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 AC079140.1-201ENST00000508039 487 ntBASIC17.57■□□□□ 0.4
SMOQ99835 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.57■□□□□ 0.4
SMOQ99835 AP000344.2-201ENST00000512987 629 ntBASIC17.57■□□□□ 0.4
SMOQ99835 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.57■□□□□ 0.4
SMOQ99835 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMOQ99835 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SMOQ99835 SNHG9-202ENST00000564014 471 ntBASIC17.57■□□□□ 0.4
SMOQ99835 SPDYE9P-201ENST00000570642 692 ntBASIC17.57■□□□□ 0.4
SMOQ99835 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.57■□□□□ 0.4
SMOQ99835 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMOQ99835 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.57■□□□□ 0.4
SMOQ99835 SPDYE10P-202ENST00000612005 668 ntBASIC17.57■□□□□ 0.4
SMOQ99835 SPDYE8P-202ENST00000612377 668 ntBASIC17.57■□□□□ 0.4
SMOQ99835 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.57■□□□□ 0.4
SMOQ99835 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SMOQ99835 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMOQ99835 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.57■□□□□ 0.4
SMOQ99835 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMOQ99835 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMOQ99835 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SMOQ99835 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
SMOQ99835 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.57■□□□□ 0.4
SMOQ99835 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMOQ99835 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMOQ99835 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SMOQ99835 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SMOQ99835 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMOQ99835 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SMOQ99835 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMOQ99835 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMOQ99835 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SMOQ99835 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
SMOQ99835 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SMOQ99835 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.56■□□□□ 0.4
SMOQ99835 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMOQ99835 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SMOQ99835 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.56■□□□□ 0.4
SMOQ99835 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SMOQ99835 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
SMOQ99835 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMOQ99835 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMOQ99835 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
SMOQ99835 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SMOQ99835 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMOQ99835 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMOQ99835 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMOQ99835 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.56■□□□□ 0.4
SMOQ99835 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.56■□□□□ 0.4
SMOQ99835 AC092183.1-201ENST00000469884 875 ntBASIC17.56■□□□□ 0.4
SMOQ99835 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.56■□□□□ 0.4
SMOQ99835 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.56■□□□□ 0.4
SMOQ99835 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.56■□□□□ 0.4
SMOQ99835 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SMOQ99835 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.56■□□□□ 0.4
SMOQ99835 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.56■□□□□ 0.4
SMOQ99835 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SMOQ99835 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SMOQ99835 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.56■□□□□ 0.4
SMOQ99835 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.56■□□□□ 0.4
SMOQ99835 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SMOQ99835 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.56■□□□□ 0.4
SMOQ99835 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SMOQ99835 AC138932.1-201ENST00000534164 6830 ntBASIC17.56■□□□□ 0.4
SMOQ99835 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SMOQ99835 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SMOQ99835 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMOQ99835 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SMOQ99835 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMOQ99835 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.55■□□□□ 0.4
SMOQ99835 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.55■□□□□ 0.4
SMOQ99835 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMOQ99835 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.55■□□□□ 0.4
SMOQ99835 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
SMOQ99835 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SMOQ99835 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.55■□□□□ 0.4
SMOQ99835 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.55■□□□□ 0.4
SMOQ99835 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.55■□□□□ 0.4
SMOQ99835 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.55■□□□□ 0.4
SMOQ99835 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMOQ99835 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
SMOQ99835 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMOQ99835 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.55■□□□□ 0.4
SMOQ99835 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMOQ99835 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.55■□□□□ 0.4
SMOQ99835 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.55■□□□□ 0.4
SMOQ99835 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SMOQ99835 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMOQ99835 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.55■□□□□ 0.4
SMOQ99835 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SMOQ99835 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.55■□□□□ 0.4
SMOQ99835 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.55■□□□□ 0.4
SMOQ99835 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.55■□□□□ 0.4
SMOQ99835 AC027612.4-201ENST00000605371 583 ntBASIC17.55■□□□□ 0.4
SMOQ99835 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMOQ99835 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMOQ99835 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SMOQ99835 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMOQ99835 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMOQ99835 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMOQ99835 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms