Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
CCL13Q99616 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CCL13Q99616 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CCL13Q99616 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC14.09□□□□□ -0.15
CCL13Q99616 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.09□□□□□ -0.15
CCL13Q99616 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCL13Q99616 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCL13Q99616 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCL13Q99616 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CCL13Q99616 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CCL13Q99616 WAC-202ENST00000347934 2839 ntTSL 5 BASIC14.09□□□□□ -0.15
CCL13Q99616 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCL13Q99616 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCL13Q99616 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCL13Q99616 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CCL13Q99616 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.09□□□□□ -0.15
CCL13Q99616 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCL13Q99616 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
CCL13Q99616 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CCL13Q99616 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.09□□□□□ -0.15
CCL13Q99616 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.09□□□□□ -0.15
CCL13Q99616 KRT18P58-201ENST00000527480 1120 ntBASIC14.09□□□□□ -0.15
CCL13Q99616 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.09□□□□□ -0.15
CCL13Q99616 AC096734.2-201ENST00000562054 433 ntBASIC14.09□□□□□ -0.15
CCL13Q99616 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.09□□□□□ -0.15
CCL13Q99616 AC005412.3-201ENST00000580309 715 ntBASIC14.09□□□□□ -0.15
CCL13Q99616 MPDU1-223ENST00000582151 728 ntBASIC14.09□□□□□ -0.15
CCL13Q99616 FAM197Y3-203ENST00000618346 717 ntBASIC14.09□□□□□ -0.15
CCL13Q99616 AL353732.1-201ENST00000569618 1459 ntBASIC14.09□□□□□ -0.15
CCL13Q99616 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCL13Q99616 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CCL13Q99616 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CCL13Q99616 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCL13Q99616 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.09□□□□□ -0.15
CCL13Q99616 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.09□□□□□ -0.15
CCL13Q99616 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.09□□□□□ -0.15
CCL13Q99616 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CCL13Q99616 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCL13Q99616 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCL13Q99616 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCL13Q99616 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.09□□□□□ -0.15
CCL13Q99616 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CCL13Q99616 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCL13Q99616 AC020916.1-201ENST00000587762 1774 ntBASIC14.09□□□□□ -0.15
CCL13Q99616 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CCL13Q99616 RNF216P1-203ENST00000404404 2427 ntBASIC14.09□□□□□ -0.15
CCL13Q99616 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CCL13Q99616 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
CCL13Q99616 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CCL13Q99616 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCL13Q99616 AL391256.1-201ENST00000443260 1855 ntBASIC14.08□□□□□ -0.16
CCL13Q99616 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.08□□□□□ -0.16
CCL13Q99616 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.16
CCL13Q99616 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCL13Q99616 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCL13Q99616 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCL13Q99616 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCL13Q99616 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCL13Q99616 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCL13Q99616 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
CCL13Q99616 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC14.08□□□□□ -0.16
CCL13Q99616 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC14.08□□□□□ -0.16
CCL13Q99616 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CCL13Q99616 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
CCL13Q99616 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.08□□□□□ -0.16
CCL13Q99616 AP002490.2-201ENST00000524791 560 ntBASIC14.08□□□□□ -0.16
CCL13Q99616 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.08□□□□□ -0.16
CCL13Q99616 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.08□□□□□ -0.16
CCL13Q99616 AC091167.2-201ENST00000579581 588 ntBASIC14.08□□□□□ -0.16
CCL13Q99616 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.08□□□□□ -0.16
CCL13Q99616 WDR88-203ENST00000592765 651 ntTSL 5 BASIC14.08□□□□□ -0.16
CCL13Q99616 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CCL13Q99616 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CCL13Q99616 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCL13Q99616 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CCL13Q99616 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.08□□□□□ -0.16
CCL13Q99616 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCL13Q99616 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCL13Q99616 BCAR1-209ENST00000546196 1340 ntBASIC14.08□□□□□ -0.16
CCL13Q99616 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCL13Q99616 NFIC-211ENST00000641145 8399 ntBASIC14.08□□□□□ -0.16
CCL13Q99616 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCL13Q99616 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCL13Q99616 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CCL13Q99616 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCL13Q99616 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC14.08□□□□□ -0.16
CCL13Q99616 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CCL13Q99616 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCL13Q99616 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CCL13Q99616 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCL13Q99616 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCL13Q99616 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCL13Q99616 AL645728.1-201ENST00000366221 2101 ntBASIC14.08□□□□□ -0.16
CCL13Q99616 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCL13Q99616 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCL13Q99616 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CCL13Q99616 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.08□□□□□ -0.16
CCL13Q99616 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CCL13Q99616 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CCL13Q99616 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms