Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SPENQ96T58 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.96□□□□□ -0.02
SPENQ96T58 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.96□□□□□ -0.02
SPENQ96T58 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.02
SPENQ96T58 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.96□□□□□ -0.02
SPENQ96T58 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
SPENQ96T58 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC14.96□□□□□ -0.02
SPENQ96T58 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.96□□□□□ -0.02
SPENQ96T58 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SPENQ96T58 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
SPENQ96T58 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SPENQ96T58 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC14.95□□□□□ -0.02
SPENQ96T58 EML3-212ENST00000494176 2901 ntTSL 2 BASIC14.95□□□□□ -0.02
SPENQ96T58 EML3-216ENST00000529309 2909 ntTSL 2 BASIC14.95□□□□□ -0.02
SPENQ96T58 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SPENQ96T58 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.95□□□□□ -0.02
SPENQ96T58 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SPENQ96T58 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
SPENQ96T58 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SPENQ96T58 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC14.95□□□□□ -0.02
SPENQ96T58 SLC7A15P-201ENST00000424028 1363 ntBASIC14.95□□□□□ -0.02
SPENQ96T58 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
SPENQ96T58 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.95□□□□□ -0.02
SPENQ96T58 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.95□□□□□ -0.02
SPENQ96T58 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SPENQ96T58 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
SPENQ96T58 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SPENQ96T58 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC14.95□□□□□ -0.02
SPENQ96T58 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SPENQ96T58 AL645728.1-201ENST00000366221 2101 ntBASIC14.95□□□□□ -0.02
SPENQ96T58 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC14.95□□□□□ -0.02
SPENQ96T58 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SPENQ96T58 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SPENQ96T58 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
SPENQ96T58 EGFEM1P-202ENST00000431685 1563 ntBASIC14.95□□□□□ -0.02
SPENQ96T58 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC14.95□□□□□ -0.02
SPENQ96T58 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.95□□□□□ -0.02
SPENQ96T58 FAM220BP-201ENST00000377689 816 ntBASIC14.95□□□□□ -0.02
SPENQ96T58 SLC25A6P5-201ENST00000435663 894 ntBASIC14.95□□□□□ -0.02
SPENQ96T58 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC14.95□□□□□ -0.02
SPENQ96T58 PRYP6-201ENST00000514804 343 ntBASIC14.95□□□□□ -0.02
SPENQ96T58 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC14.95□□□□□ -0.02
SPENQ96T58 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
SPENQ96T58 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SPENQ96T58 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SPENQ96T58 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC14.94□□□□□ -0.02
SPENQ96T58 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
SPENQ96T58 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SPENQ96T58 USP32P1-208ENST00000506594 1164 ntBASIC14.94□□□□□ -0.02
SPENQ96T58 RAB43P1-201ENST00000561790 589 ntBASIC14.94□□□□□ -0.02
SPENQ96T58 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.94□□□□□ -0.02
SPENQ96T58 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
SPENQ96T58 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC14.94□□□□□ -0.02
SPENQ96T58 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
SPENQ96T58 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
SPENQ96T58 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
SPENQ96T58 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
SPENQ96T58 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
SPENQ96T58 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.94□□□□□ -0.02
SPENQ96T58 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
SPENQ96T58 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SPENQ96T58 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SPENQ96T58 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC14.94□□□□□ -0.02
SPENQ96T58 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.94□□□□□ -0.02
SPENQ96T58 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SPENQ96T58 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SPENQ96T58 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SPENQ96T58 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SPENQ96T58 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SPENQ96T58 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
SPENQ96T58 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SPENQ96T58 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SPENQ96T58 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SPENQ96T58 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.94□□□□□ -0.02
SPENQ96T58 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SPENQ96T58 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC14.93□□□□□ -0.02
SPENQ96T58 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC14.93□□□□□ -0.02
SPENQ96T58 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
SPENQ96T58 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.93□□□□□ -0.02
SPENQ96T58 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
SPENQ96T58 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.93□□□□□ -0.02
SPENQ96T58 SPDYE19P-201ENST00000338590 713 ntBASIC14.93□□□□□ -0.02
SPENQ96T58 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
SPENQ96T58 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SPENQ96T58 AC098850.1-201ENST00000419919 790 ntBASIC14.93□□□□□ -0.02
SPENQ96T58 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC14.93□□□□□ -0.02
SPENQ96T58 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.93□□□□□ -0.02
SPENQ96T58 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
SPENQ96T58 AC018665.1-201ENST00000622927 1362 ntBASIC14.93□□□□□ -0.02
SPENQ96T58 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC14.93□□□□□ -0.02
SPENQ96T58 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
SPENQ96T58 AC011676.5-201ENST00000624864 2660 ntBASIC14.93□□□□□ -0.02
SPENQ96T58 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SPENQ96T58 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
SPENQ96T58 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
SPENQ96T58 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.93□□□□□ -0.02
SPENQ96T58 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.93□□□□□ -0.02
SPENQ96T58 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SPENQ96T58 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SPENQ96T58 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms