Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RAB40CQ96S21 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB40CQ96S21 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB40CQ96S21 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB40CQ96S21 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RAB40CQ96S21 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB40CQ96S21 LGALS8-AS1-201ENST00000487567 1457 ntBASIC13.69□□□□□ -0.22
RAB40CQ96S21 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC13.69□□□□□ -0.22
RAB40CQ96S21 AL353593.2-201ENST00000602529 1483 ntBASIC13.69□□□□□ -0.22
RAB40CQ96S21 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB40CQ96S21 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC13.69□□□□□ -0.22
RAB40CQ96S21 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RAB40CQ96S21 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
RAB40CQ96S21 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB40CQ96S21 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC13.69□□□□□ -0.22
RAB40CQ96S21 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC13.69□□□□□ -0.22
RAB40CQ96S21 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RAB40CQ96S21 AC092384.3-202ENST00000564646 2873 ntBASIC13.69□□□□□ -0.22
RAB40CQ96S21 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB40CQ96S21 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC13.69□□□□□ -0.22
RAB40CQ96S21 TERF1P1-201ENST00000311003 1181 ntBASIC13.69□□□□□ -0.22
RAB40CQ96S21 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB40CQ96S21 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB40CQ96S21 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
RAB40CQ96S21 AC005521.1-201ENST00000393351 872 ntBASIC13.69□□□□□ -0.22
RAB40CQ96S21 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC13.69□□□□□ -0.22
RAB40CQ96S21 STARP1-201ENST00000397973 869 ntBASIC13.69□□□□□ -0.22
RAB40CQ96S21 CD70-202ENST00000423145 881 ntTSL 2 BASIC13.69□□□□□ -0.22
RAB40CQ96S21 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC13.69□□□□□ -0.22
RAB40CQ96S21 BX664615.1-201ENST00000443558 458 ntBASIC13.69□□□□□ -0.22
RAB40CQ96S21 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
RAB40CQ96S21 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB40CQ96S21 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC13.69□□□□□ -0.22
RAB40CQ96S21 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RAB40CQ96S21 AL023973.1-201ENST00000624619 620 ntBASIC13.69□□□□□ -0.22
RAB40CQ96S21 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC13.69□□□□□ -0.22
RAB40CQ96S21 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB40CQ96S21 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RAB40CQ96S21 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RAB40CQ96S21 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB40CQ96S21 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB40CQ96S21 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC13.69□□□□□ -0.22
RAB40CQ96S21 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB40CQ96S21 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB40CQ96S21 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RAB40CQ96S21 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC13.69□□□□□ -0.22
RAB40CQ96S21 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB40CQ96S21 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB40CQ96S21 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC13.69□□□□□ -0.22
RAB40CQ96S21 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
RAB40CQ96S21 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC13.69□□□□□ -0.22
RAB40CQ96S21 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RAB40CQ96S21 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
RAB40CQ96S21 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC13.68□□□□□ -0.22
RAB40CQ96S21 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
RAB40CQ96S21 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB40CQ96S21 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB40CQ96S21 AC005052.1-201ENST00000625181 2492 ntBASIC13.68□□□□□ -0.22
RAB40CQ96S21 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB40CQ96S21 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
RAB40CQ96S21 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
RAB40CQ96S21 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC13.68□□□□□ -0.22
RAB40CQ96S21 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB40CQ96S21 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB40CQ96S21 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC13.68□□□□□ -0.22
RAB40CQ96S21 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RAB40CQ96S21 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB40CQ96S21 AC003669.1-201ENST00000334569 611 ntBASIC13.68□□□□□ -0.22
RAB40CQ96S21 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC13.68□□□□□ -0.22
RAB40CQ96S21 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RAB40CQ96S21 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
RAB40CQ96S21 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RAB40CQ96S21 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
RAB40CQ96S21 COX11P1-201ENST00000489116 835 ntBASIC13.68□□□□□ -0.22
RAB40CQ96S21 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC13.68□□□□□ -0.22
RAB40CQ96S21 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC13.68□□□□□ -0.22
RAB40CQ96S21 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RAB40CQ96S21 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC13.68□□□□□ -0.22
RAB40CQ96S21 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC13.68□□□□□ -0.22
RAB40CQ96S21 P4HB-223ENST00000576390 439 ntTSL 4 BASIC13.68□□□□□ -0.22
RAB40CQ96S21 AL139011.1-202ENST00000642063 584 ntBASIC13.68□□□□□ -0.22
RAB40CQ96S21 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.68□□□□□ -0.22
RAB40CQ96S21 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB40CQ96S21 AL596087.1-201ENST00000400979 1969 ntBASIC13.68□□□□□ -0.22
RAB40CQ96S21 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB40CQ96S21 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB40CQ96S21 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB40CQ96S21 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB40CQ96S21 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
RAB40CQ96S21 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB40CQ96S21 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB40CQ96S21 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB40CQ96S21 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC13.68□□□□□ -0.22
RAB40CQ96S21 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB40CQ96S21 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC13.68□□□□□ -0.22
RAB40CQ96S21 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RAB40CQ96S21 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB40CQ96S21 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB40CQ96S21 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB40CQ96S21 GCK-202ENST00000345378 2421 ntTSL 2 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms