Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.97■□□□□ 0.15
BBS4Q96RK4 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
BBS4Q96RK4 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
BBS4Q96RK4 AL645728.1-201ENST00000366221 2101 ntBASIC15.97■□□□□ 0.15
BBS4Q96RK4 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
BBS4Q96RK4 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.97■□□□□ 0.15
BBS4Q96RK4 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
BBS4Q96RK4 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
BBS4Q96RK4 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
BBS4Q96RK4 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.97■□□□□ 0.15
BBS4Q96RK4 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.97■□□□□ 0.15
BBS4Q96RK4 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
BBS4Q96RK4 AC004870.1-201ENST00000315132 882 ntBASIC15.97■□□□□ 0.15
BBS4Q96RK4 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
BBS4Q96RK4 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15.97■□□□□ 0.15
BBS4Q96RK4 PAWRP1-201ENST00000451083 565 ntBASIC15.97■□□□□ 0.15
BBS4Q96RK4 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
BBS4Q96RK4 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.97■□□□□ 0.15
BBS4Q96RK4 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
BBS4Q96RK4 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.97■□□□□ 0.15
BBS4Q96RK4 MIR1199-201ENST00000621445 119 ntBASIC15.97■□□□□ 0.15
BBS4Q96RK4 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
BBS4Q96RK4 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
BBS4Q96RK4 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
BBS4Q96RK4 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
BBS4Q96RK4 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.97■□□□□ 0.15
BBS4Q96RK4 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
BBS4Q96RK4 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.97■□□□□ 0.15
BBS4Q96RK4 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
BBS4Q96RK4 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
BBS4Q96RK4 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
BBS4Q96RK4 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
BBS4Q96RK4 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
BBS4Q96RK4 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
BBS4Q96RK4 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.97■□□□□ 0.15
BBS4Q96RK4 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
BBS4Q96RK4 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
BBS4Q96RK4 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.97■□□□□ 0.15
BBS4Q96RK4 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
BBS4Q96RK4 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
BBS4Q96RK4 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
BBS4Q96RK4 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
BBS4Q96RK4 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
BBS4Q96RK4 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.96■□□□□ 0.15
BBS4Q96RK4 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
BBS4Q96RK4 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.96■□□□□ 0.15
BBS4Q96RK4 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
BBS4Q96RK4 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
BBS4Q96RK4 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
BBS4Q96RK4 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
BBS4Q96RK4 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
BBS4Q96RK4 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.96■□□□□ 0.15
BBS4Q96RK4 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
BBS4Q96RK4 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.96■□□□□ 0.15
BBS4Q96RK4 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
BBS4Q96RK4 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.96■□□□□ 0.15
BBS4Q96RK4 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
BBS4Q96RK4 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
BBS4Q96RK4 RPS2P28-201ENST00000314255 741 ntBASIC15.96■□□□□ 0.15
BBS4Q96RK4 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.96■□□□□ 0.15
BBS4Q96RK4 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.96■□□□□ 0.15
BBS4Q96RK4 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
BBS4Q96RK4 AL450487.1-201ENST00000426799 995 ntBASIC15.96■□□□□ 0.15
BBS4Q96RK4 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
BBS4Q96RK4 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC15.96■□□□□ 0.15
BBS4Q96RK4 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.96■□□□□ 0.15
BBS4Q96RK4 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
BBS4Q96RK4 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.96■□□□□ 0.15
BBS4Q96RK4 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.96■□□□□ 0.15
BBS4Q96RK4 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.96■□□□□ 0.15
BBS4Q96RK4 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
BBS4Q96RK4 AL691432.3-201ENST00000621860 400 ntBASIC15.96■□□□□ 0.15
BBS4Q96RK4 TP73-AS1-207ENST00000624167 988 ntBASIC15.96■□□□□ 0.15
BBS4Q96RK4 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.96■□□□□ 0.15
BBS4Q96RK4 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
BBS4Q96RK4 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
BBS4Q96RK4 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.96■□□□□ 0.15
BBS4Q96RK4 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
BBS4Q96RK4 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
BBS4Q96RK4 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
BBS4Q96RK4 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
BBS4Q96RK4 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.96■□□□□ 0.15
BBS4Q96RK4 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.96■□□□□ 0.14
BBS4Q96RK4 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
BBS4Q96RK4 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
BBS4Q96RK4 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
BBS4Q96RK4 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.95■□□□□ 0.14
BBS4Q96RK4 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.95■□□□□ 0.14
BBS4Q96RK4 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
BBS4Q96RK4 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
BBS4Q96RK4 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.95■□□□□ 0.14
BBS4Q96RK4 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.95■□□□□ 0.14
BBS4Q96RK4 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
BBS4Q96RK4 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
BBS4Q96RK4 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
BBS4Q96RK4 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
BBS4Q96RK4 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.95■□□□□ 0.14
BBS4Q96RK4 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.95■□□□□ 0.14
BBS4Q96RK4 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.95■□□□□ 0.14
BBS4Q96RK4 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms