Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC85AQ96PX6 OR6D1P-202ENST00000641007 5290 ntBASIC20.8■□□□□ 0.92
CCDC85AQ96PX6 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC85AQ96PX6 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CCDC85AQ96PX6 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC85AQ96PX6 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC85AQ96PX6 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
CCDC85AQ96PX6 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC85AQ96PX6 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC20.8■□□□□ 0.92
CCDC85AQ96PX6 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC85AQ96PX6 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC20.8■□□□□ 0.92
CCDC85AQ96PX6 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC20.8■□□□□ 0.92
CCDC85AQ96PX6 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC85AQ96PX6 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC85AQ96PX6 TREML5P-201ENST00000421694 576 ntBASIC20.8■□□□□ 0.92
CCDC85AQ96PX6 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC20.8■□□□□ 0.92
CCDC85AQ96PX6 AC125807.1-201ENST00000483097 614 ntBASIC20.8■□□□□ 0.92
CCDC85AQ96PX6 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC20.8■□□□□ 0.92
CCDC85AQ96PX6 KRT8P23-201ENST00000560090 1207 ntBASIC20.8■□□□□ 0.92
CCDC85AQ96PX6 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC85AQ96PX6 MIR6080-201ENST00000617359 66 ntBASIC20.8■□□□□ 0.92
CCDC85AQ96PX6 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC85AQ96PX6 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC85AQ96PX6 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CCDC85AQ96PX6 FO538757.1-201ENST00000623083 1397 ntBASIC20.8■□□□□ 0.92
CCDC85AQ96PX6 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC85AQ96PX6 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC85AQ96PX6 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC85AQ96PX6 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC85AQ96PX6 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC20.79■□□□□ 0.92
CCDC85AQ96PX6 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC85AQ96PX6 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC85AQ96PX6 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC85AQ96PX6 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC85AQ96PX6 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC85AQ96PX6 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC85AQ96PX6 LINC00895-201ENST00000629028 1637 ntBASIC20.79■□□□□ 0.92
CCDC85AQ96PX6 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
CCDC85AQ96PX6 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC85AQ96PX6 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CCDC85AQ96PX6 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC20.79■□□□□ 0.92
CCDC85AQ96PX6 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC85AQ96PX6 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC85AQ96PX6 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC20.79■□□□□ 0.92
CCDC85AQ96PX6 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC20.79■□□□□ 0.92
CCDC85AQ96PX6 KLF2P3-201ENST00000451977 1087 ntBASIC20.79■□□□□ 0.92
CCDC85AQ96PX6 AC067863.1-201ENST00000494933 530 ntBASIC20.79■□□□□ 0.92
CCDC85AQ96PX6 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC85AQ96PX6 AC015911.4-201ENST00000588022 1070 ntBASIC20.79■□□□□ 0.92
CCDC85AQ96PX6 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC20.79■□□□□ 0.92
CCDC85AQ96PX6 AC008267.7-201ENST00000624570 1194 ntBASIC20.79■□□□□ 0.92
CCDC85AQ96PX6 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC85AQ96PX6 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC85AQ96PX6 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC85AQ96PX6 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC85AQ96PX6 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC20.79■□□□□ 0.92
CCDC85AQ96PX6 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC20.78■□□□□ 0.92
CCDC85AQ96PX6 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC85AQ96PX6 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC20.78■□□□□ 0.92
CCDC85AQ96PX6 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC85AQ96PX6 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC85AQ96PX6 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC20.78■□□□□ 0.92
CCDC85AQ96PX6 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC85AQ96PX6 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CCDC85AQ96PX6 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC85AQ96PX6 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC20.78■□□□□ 0.92
CCDC85AQ96PX6 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC20.78■□□□□ 0.92
CCDC85AQ96PX6 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC85AQ96PX6 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC20.78■□□□□ 0.92
CCDC85AQ96PX6 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC85AQ96PX6 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC85AQ96PX6 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC20.78■□□□□ 0.92
CCDC85AQ96PX6 AC055876.3-201ENST00000431496 288 ntBASIC20.78■□□□□ 0.92
CCDC85AQ96PX6 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CCDC85AQ96PX6 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC20.78■□□□□ 0.92
CCDC85AQ96PX6 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC20.78■□□□□ 0.92
CCDC85AQ96PX6 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC20.78■□□□□ 0.92
CCDC85AQ96PX6 ALG1L8P-201ENST00000533887 760 ntBASIC20.78■□□□□ 0.92
CCDC85AQ96PX6 AL512356.2-201ENST00000546955 174 ntBASIC20.78■□□□□ 0.92
CCDC85AQ96PX6 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC20.78■□□□□ 0.92
CCDC85AQ96PX6 AC138649.4-201ENST00000612222 287 ntBASIC20.78■□□□□ 0.92
CCDC85AQ96PX6 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC85AQ96PX6 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC85AQ96PX6 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC85AQ96PX6 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC85AQ96PX6 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CCDC85AQ96PX6 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC85AQ96PX6 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC85AQ96PX6 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC85AQ96PX6 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC85AQ96PX6 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CCDC85AQ96PX6 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC85AQ96PX6 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC85AQ96PX6 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC20.77■□□□□ 0.92
CCDC85AQ96PX6 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC20.77■□□□□ 0.92
CCDC85AQ96PX6 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC85AQ96PX6 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC85AQ96PX6 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC85AQ96PX6 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC85AQ96PX6 WRB-204ENST00000398753 699 ntTSL 3 BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms