Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.41■□□□□ 0.22
PDLIM5Q96HC4 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDLIM5Q96HC4 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.41■□□□□ 0.22
PDLIM5Q96HC4 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.41■□□□□ 0.22
PDLIM5Q96HC4 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.41■□□□□ 0.22
PDLIM5Q96HC4 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PDLIM5Q96HC4 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PDLIM5Q96HC4 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDLIM5Q96HC4 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.4■□□□□ 0.22
PDLIM5Q96HC4 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
PDLIM5Q96HC4 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.4■□□□□ 0.22
PDLIM5Q96HC4 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PDLIM5Q96HC4 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
PDLIM5Q96HC4 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
PDLIM5Q96HC4 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
PDLIM5Q96HC4 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDLIM5Q96HC4 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.4■□□□□ 0.22
PDLIM5Q96HC4 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
PDLIM5Q96HC4 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDLIM5Q96HC4 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDLIM5Q96HC4 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
PDLIM5Q96HC4 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PDLIM5Q96HC4 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.4■□□□□ 0.22
PDLIM5Q96HC4 MTHFR-217ENST00000641820 1569 ntBASIC16.4■□□□□ 0.22
PDLIM5Q96HC4 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDLIM5Q96HC4 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.4■□□□□ 0.22
PDLIM5Q96HC4 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.4■□□□□ 0.22
PDLIM5Q96HC4 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.4■□□□□ 0.22
PDLIM5Q96HC4 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDLIM5Q96HC4 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.4■□□□□ 0.22
PDLIM5Q96HC4 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.4■□□□□ 0.22
PDLIM5Q96HC4 MIR4515-201ENST00000584082 81 ntBASIC16.4■□□□□ 0.22
PDLIM5Q96HC4 ACTL9-202ENST00000612068 1252 ntBASIC16.4■□□□□ 0.22
PDLIM5Q96HC4 MIR7706-201ENST00000613747 67 ntBASIC16.4■□□□□ 0.22
PDLIM5Q96HC4 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDLIM5Q96HC4 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDLIM5Q96HC4 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.4■□□□□ 0.22
PDLIM5Q96HC4 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDLIM5Q96HC4 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.4■□□□□ 0.22
PDLIM5Q96HC4 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDLIM5Q96HC4 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDLIM5Q96HC4 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.4■□□□□ 0.22
PDLIM5Q96HC4 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
PDLIM5Q96HC4 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PDLIM5Q96HC4 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PDLIM5Q96HC4 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.4■□□□□ 0.22
PDLIM5Q96HC4 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDLIM5Q96HC4 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDLIM5Q96HC4 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
PDLIM5Q96HC4 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PDLIM5Q96HC4 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
PDLIM5Q96HC4 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.22
PDLIM5Q96HC4 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PDLIM5Q96HC4 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.39■□□□□ 0.21
PDLIM5Q96HC4 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PDLIM5Q96HC4 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PDLIM5Q96HC4 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.39■□□□□ 0.21
PDLIM5Q96HC4 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PDLIM5Q96HC4 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PDLIM5Q96HC4 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
PDLIM5Q96HC4 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
PDLIM5Q96HC4 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PDLIM5Q96HC4 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PDLIM5Q96HC4 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PDLIM5Q96HC4 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
PDLIM5Q96HC4 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.39■□□□□ 0.21
PDLIM5Q96HC4 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PDLIM5Q96HC4 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PDLIM5Q96HC4 AC092910.1-201ENST00000482027 1129 ntBASIC16.39■□□□□ 0.21
PDLIM5Q96HC4 AL662844.1-201ENST00000546340 181 ntBASIC16.39■□□□□ 0.21
PDLIM5Q96HC4 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
PDLIM5Q96HC4 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.39■□□□□ 0.21
PDLIM5Q96HC4 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
PDLIM5Q96HC4 AL049840.3-201ENST00000602669 611 ntBASIC16.39■□□□□ 0.21
PDLIM5Q96HC4 AC116407.3-201ENST00000623905 1129 ntBASIC16.39■□□□□ 0.21
PDLIM5Q96HC4 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PDLIM5Q96HC4 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
PDLIM5Q96HC4 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PDLIM5Q96HC4 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.39■□□□□ 0.21
PDLIM5Q96HC4 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.39■□□□□ 0.21
PDLIM5Q96HC4 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.39■□□□□ 0.21
PDLIM5Q96HC4 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PDLIM5Q96HC4 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.39■□□□□ 0.21
PDLIM5Q96HC4 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PDLIM5Q96HC4 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.39■□□□□ 0.21
PDLIM5Q96HC4 AC012569.1-201ENST00000591191 1524 ntBASIC16.39■□□□□ 0.21
PDLIM5Q96HC4 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PDLIM5Q96HC4 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PDLIM5Q96HC4 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
PDLIM5Q96HC4 GPAA1P2-202ENST00000606848 1787 ntBASIC16.38■□□□□ 0.21
PDLIM5Q96HC4 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PDLIM5Q96HC4 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
PDLIM5Q96HC4 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.38■□□□□ 0.21
PDLIM5Q96HC4 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PDLIM5Q96HC4 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
PDLIM5Q96HC4 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PDLIM5Q96HC4 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
PDLIM5Q96HC4 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
PDLIM5Q96HC4 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
PDLIM5Q96HC4 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms