Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
ECHDC3Q96DC8 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
ECHDC3Q96DC8 WASH6P-202ENST00000359512 1437 ntBASIC16.76■□□□□ 0.27
ECHDC3Q96DC8 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ECHDC3Q96DC8 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ECHDC3Q96DC8 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ECHDC3Q96DC8 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ECHDC3Q96DC8 AC006538.1-201ENST00000567905 1585 ntBASIC16.76■□□□□ 0.27
ECHDC3Q96DC8 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
ECHDC3Q96DC8 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
ECHDC3Q96DC8 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ECHDC3Q96DC8 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ECHDC3Q96DC8 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ECHDC3Q96DC8 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
ECHDC3Q96DC8 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
ECHDC3Q96DC8 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.75■□□□□ 0.27
ECHDC3Q96DC8 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.75■□□□□ 0.27
ECHDC3Q96DC8 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ECHDC3Q96DC8 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ECHDC3Q96DC8 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ECHDC3Q96DC8 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
ECHDC3Q96DC8 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ECHDC3Q96DC8 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.75■□□□□ 0.27
ECHDC3Q96DC8 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.75■□□□□ 0.27
ECHDC3Q96DC8 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
ECHDC3Q96DC8 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ECHDC3Q96DC8 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
ECHDC3Q96DC8 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ECHDC3Q96DC8 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ECHDC3Q96DC8 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.75■□□□□ 0.27
ECHDC3Q96DC8 AC254562.1-201ENST00000417586 456 ntBASIC16.75■□□□□ 0.27
ECHDC3Q96DC8 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.75■□□□□ 0.27
ECHDC3Q96DC8 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.75■□□□□ 0.27
ECHDC3Q96DC8 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.75■□□□□ 0.27
ECHDC3Q96DC8 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.75■□□□□ 0.27
ECHDC3Q96DC8 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
ECHDC3Q96DC8 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.75■□□□□ 0.27
ECHDC3Q96DC8 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ECHDC3Q96DC8 AC026120.1-201ENST00000611536 926 ntBASIC16.75■□□□□ 0.27
ECHDC3Q96DC8 AL691403.2-201ENST00000618460 490 ntBASIC16.75■□□□□ 0.27
ECHDC3Q96DC8 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ECHDC3Q96DC8 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ECHDC3Q96DC8 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.75■□□□□ 0.27
ECHDC3Q96DC8 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.75■□□□□ 0.27
ECHDC3Q96DC8 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ECHDC3Q96DC8 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.75■□□□□ 0.27
ECHDC3Q96DC8 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
ECHDC3Q96DC8 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ECHDC3Q96DC8 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
ECHDC3Q96DC8 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ECHDC3Q96DC8 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.75■□□□□ 0.27
ECHDC3Q96DC8 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.75■□□□□ 0.27
ECHDC3Q96DC8 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ECHDC3Q96DC8 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
ECHDC3Q96DC8 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ECHDC3Q96DC8 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.74■□□□□ 0.27
ECHDC3Q96DC8 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
ECHDC3Q96DC8 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
ECHDC3Q96DC8 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ECHDC3Q96DC8 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ECHDC3Q96DC8 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ECHDC3Q96DC8 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ECHDC3Q96DC8 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ECHDC3Q96DC8 TFAMP1-201ENST00000412727 736 ntBASIC16.74■□□□□ 0.27
ECHDC3Q96DC8 DNAJB3-202ENST00000449667 1266 ntBASIC16.74■□□□□ 0.27
ECHDC3Q96DC8 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
ECHDC3Q96DC8 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.74■□□□□ 0.27
ECHDC3Q96DC8 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.74■□□□□ 0.27
ECHDC3Q96DC8 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.74■□□□□ 0.27
ECHDC3Q96DC8 AL135744.1-201ENST00000565098 629 ntBASIC16.74■□□□□ 0.27
ECHDC3Q96DC8 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
ECHDC3Q96DC8 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.74■□□□□ 0.27
ECHDC3Q96DC8 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.74■□□□□ 0.27
ECHDC3Q96DC8 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.74■□□□□ 0.27
ECHDC3Q96DC8 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
ECHDC3Q96DC8 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ECHDC3Q96DC8 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
ECHDC3Q96DC8 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ECHDC3Q96DC8 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ECHDC3Q96DC8 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
ECHDC3Q96DC8 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ECHDC3Q96DC8 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ECHDC3Q96DC8 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ECHDC3Q96DC8 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ECHDC3Q96DC8 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ECHDC3Q96DC8 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
ECHDC3Q96DC8 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ECHDC3Q96DC8 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
ECHDC3Q96DC8 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
ECHDC3Q96DC8 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ECHDC3Q96DC8 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ECHDC3Q96DC8 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ECHDC3Q96DC8 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ECHDC3Q96DC8 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
ECHDC3Q96DC8 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ECHDC3Q96DC8 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ECHDC3Q96DC8 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ECHDC3Q96DC8 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.73■□□□□ 0.27
ECHDC3Q96DC8 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ECHDC3Q96DC8 AC016027.1-202ENST00000607927 1699 ntBASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms